Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 MTND4P10-201ENST00000446199 1363 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 MTND4P22-201ENST00000413116 1169 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 TXNP1-201ENST00000441872 371 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 PSMC1P13-201ENST00000458195 985 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 snoU109.6-201ENST00000516831 118 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 MTCYBP19-201ENST00000517463 1124 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 AP006245.1-201ENST00000522549 120 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 OR4C2P-201ENST00000530855 1064 ntBASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.26□□□□□ -2.05
ALMS1Q8TCU4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 RNU6-7-201ENST00000364784 107 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 RNU6-8-201ENST00000365467 107 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 MIR1261-201ENST00000408659 82 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 HMGN1P24-201ENST00000412282 298 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC027290.2-201ENST00000623210 18662 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AL035458.1-201ENST00000433096 585 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC105272.1-201ENST00000438604 198 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 SPATA2P1-201ENST00000431223 2055 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 ZNF826P-207ENST00000622273 1910 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 RNA5SP235-201ENST00000365411 114 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 SNORA18.3-201ENST00000384122 132 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC092045.1-201ENST00000495716 1231 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 FCF1P3-201ENST00000496394 590 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC091515.1-201ENST00000548110 679 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 HIGD1AP1-201ENST00000550979 275 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC009948.4-201ENST00000604692 675 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AC004832.5-201ENST00000608677 401 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 CDC27P2-201ENST00000425026 1922 ntBASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ALMS1Q8TCU4 AL359693.1-201ENST00000614959 2407 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 RNU1-87P-201ENST00000363727 170 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC010655.1-201ENST00000449336 292 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC009101.1-201ENST00000568135 242 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 CYP4A43P-201ENST00000568156 121 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 OR6R2P-201ENST00000609216 300 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AP003122.5-201ENST00000527668 3766 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 OR13C3-201ENST00000374781 1108 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 SETP5-201ENST00000437270 562 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 HMGB3P8-201ENST00000449709 577 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 OR2AS2P-201ENST00000606902 342 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC112503.1-201ENST00000608436 391 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 S100A11P1-201ENST00000477525 312 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 COX6B1P6-201ENST00000522347 255 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 CYP2C60P-201ENST00000566088 139 ntBASIC2.24□□□□□ -2.05
ALMS1Q8TCU4 MIR4644-201ENST00000579929 84 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms