Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC106038.2-201ENST00000520706 568 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 RN7SL652P-201ENST00000577769 300 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 WISP1-OT1-201ENST00000602893 642 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AL355816.1-201ENST00000607951 118 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AL354760.1-201ENST00000608357 643 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AL359715.5-201ENST00000623431 443 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 CR392039.4-201ENST00000624968 501 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 PCMTD1P7-201ENST00000634506 357 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 AC009313.2-201ENST00000417893 1941 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SMC1BQ8NDV3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 RNA5SP366-201ENST00000365454 123 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC140479.3-201ENST00000418944 1126 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC009238.2-201ENST00000431026 355 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC007389.2-201ENST00000434630 306 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 RPL23AP93-201ENST00000440847 484 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 TAF9P1-201ENST00000445421 515 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 TAF9P2-201ENST00000454958 515 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 ENPP7P11-201ENST00000505915 627 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC091868.1-201ENST00000508746 304 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 HSPE1P23-201ENST00000509838 286 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 RPL7L1P13-201ENST00000511702 739 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 RNU6-1261P-201ENST00000517194 104 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 NDUFA5P2-201ENST00000519723 344 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AP000859.1-201ENST00000525536 307 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 HIGD1AP10-201ENST00000527837 282 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 VN1R92P-201ENST00000598511 928 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC069200.1-201ENST00000609511 323 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AL122125.1-201ENST00000616999 600 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AL031667.3-201ENST00000620124 655 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC026634.1-201ENST00000634369 198 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC011755.1-201ENST00000623763 2049 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 ZNF137P-201ENST00000456718 1920 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 AC025125.1-201ENST00000624743 1922 ntBASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMC1BQ8NDV3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 RNU6-500P-201ENST00000362349 107 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 SNORA26.8-201ENST00000391306 124 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 MTCO3P1-205ENST00000422088 832 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 MTND1P30-201ENST00000441241 901 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC004980.3-201ENST00000447046 365 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 RPL21P71-201ENST00000465598 459 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 RN7SL814P-201ENST00000487715 300 ntBASIC5.67□□□□□ -1.5
SMC1BQ8NDV3 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms