Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 AC109315.1-201ENST00000584143 1347 ntBASIC4.21□□□□□ -1.74
CLIP4Q8N3C7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC131971.1-201ENST00000332881 1482 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC021146.4-201ENST00000309229 279 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MIR105-2-201ENST00000385083 81 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MIR92A2-201ENST00000385299 75 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 Z98745.1-201ENST00000402553 494 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL590290.1-201ENST00000405336 380 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RNU6-920P-201ENST00000410926 92 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RN7SKP216-201ENST00000411050 312 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 OR51A3P-201ENST00000413596 924 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC244035.1-201ENST00000430042 390 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL031663.1-201ENST00000437445 219 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MUPP-201ENST00000438111 566 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ELOCP10-201ENST00000440624 327 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RPS7P5-201ENST00000441482 581 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 YWHAQP9-201ENST00000445891 512 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AL354710.1-201ENST00000453641 246 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 HIGD1AP8-201ENST00000453927 274 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 PNPLA4P1-201ENST00000458328 305 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MTND1P16-201ENST00000465177 898 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RN7SL329P-201ENST00000467740 299 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC012158.1-204ENST00000483430 465 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 NCOR1P1-202ENST00000486162 291 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC068724.1-201ENST00000487100 792 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC008885.2-201ENST00000509506 930 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AP000676.2-201ENST00000529711 301 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC012435.1-202ENST00000568772 240 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MIR3934-201ENST00000579806 107 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 OR4K7P-201ENST00000580232 945 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MIR4737-201ENST00000583979 81 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 HMGB2P1-201ENST00000591146 634 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RPL7P50-201ENST00000600588 727 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ELOCP34-201ENST00000604436 327 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 AC068792.1-201ENST00000621354 417 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ATE1-AS1-202ENST00000636460 506 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLIP4Q8N3C7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC108467.2-201ENST00000617640 1597 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 ZNF833P-201ENST00000424938 1494 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 SDAD1P1-202ENST00000524156 2051 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RNU6-648P-201ENST00000410190 107 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RNU2-6P-201ENST00000411404 190 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC099336.2-201ENST00000422457 254 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 VN1R54P-201ENST00000435210 1049 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 ELOCP30-201ENST00000447108 299 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 VN1R32P-201ENST00000452234 905 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 RPL12P26-201ENST00000452430 487 ntBASIC4.19□□□□□ -1.74
CLIP4Q8N3C7 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms