Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RPS27AP13-201ENST00000498403 237 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 MTCYBP16-201ENST00000509187 1129 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 MTCO1P30-201ENST00000515244 580 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 TVP23BP1-201ENST00000557500 617 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 EIF5A2P1-201ENST00000564027 460 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 MIR4504-201ENST00000577413 92 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 RN7SL600P-201ENST00000581811 299 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC005332.6-201ENST00000613178 446 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 AC011978.2-201ENST00000569835 2054 ntBASIC4.8□□□□□ -1.64
HERC6Q8IVU3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HERC6Q8IVU3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 MIR3065-201ENST00000390137 79 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 RPL17P50-201ENST00000396131 546 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 TAF9BP1-201ENST00000396646 746 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AL078604.1-201ENST00000404609 466 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 SNORA11.1-201ENST00000408133 129 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 NRBF2P2-201ENST00000413087 861 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 RPP40P1-201ENST00000426762 456 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 NPM1P34-201ENST00000428821 893 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 SKP1P3-201ENST00000429280 487 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 YWHAZP8-201ENST00000436935 731 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AL450263.2-201ENST00000439400 589 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC104651.2-201ENST00000447549 528 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AL162151.2-201ENST00000448875 158 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 RPL5P32-201ENST00000454085 879 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 RFC5P1-201ENST00000454419 874 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 KLRA1P-201ENST00000503499 986 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 OR5H4P-201ENST00000510851 923 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC124068.1-201ENST00000563131 678 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC009097.3-201ENST00000563557 1018 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC097505.1-201ENST00000610199 565 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 MIR6875-201ENST00000617506 72 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 AC097520.1-201ENST00000624435 385 ntBASIC4.79□□□□□ -1.64
HERC6Q8IVU3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.79□□□□□ -1.64
HERC6Q8IVU3 MTND5P31-201ENST00000419366 1374 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 MAPK10-286ENST00000641208 8747 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 SUGT1P1-201ENST00000379514 476 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 RNU6-1242P-201ENST00000391052 103 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AL592291.1-201ENST00000403830 352 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AL080315.1-201ENST00000406055 466 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 BOLA3P4-201ENST00000418151 400 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 MTCO3P1-205ENST00000422088 832 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC008065.1-201ENST00000428525 348 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 BTF3P10-201ENST00000433415 495 ntBASIC4.78□□□□□ -1.64
HERC6Q8IVU3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.78□□□□□ -1.64
HERC6Q8IVU3 AC004022.1-201ENST00000447766 1066 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms