Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LTV1P1-201ENST00000510683 1237 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 IGLV2-28-201ENST00000520681 304 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 ARL2BPP5-201ENST00000523141 481 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 EDDM3DP-201ENST00000554692 434 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 AL512347.1-201ENST00000566420 503 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 SNORD39.3-201ENST00000584451 71 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 NBR2-204ENST00000587322 63 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 RPL7P50-201ENST00000600588 727 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 AL451064.1-201ENST00000607718 471 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 MIR7154-201ENST00000620673 73 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 AC073530.2-201ENST00000623987 261 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 FP325313.1-201ENST00000638228 703 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHFQ7M4L6 PHKBP1-201ENST00000450951 1951 ntBASIC4.12□□□□□ -1.75
SHFQ7M4L6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHFQ7M4L6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHFQ7M4L6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHFQ7M4L6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SHFQ7M4L6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RNA5SP52-201ENST00000362448 134 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 RNU6-253P-201ENST00000384730 105 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MIR506-201ENST00000384998 124 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPL23AP48-201ENST00000406913 488 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC073136.2-201ENST00000417282 849 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPL36P19-201ENST00000430744 301 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MTND6P18-201ENST00000439477 513 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MTND2P20-201ENST00000440805 661 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 OR1H1P-201ENST00000448731 937 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 PPIAP20-201ENST00000449839 135 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 HMGN3P1-201ENST00000453847 193 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPL31P3-201ENST00000458430 332 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC092754.2-201ENST00000463506 460 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPS26P39-201ENST00000469206 341 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPL23AP2-201ENST00000471227 466 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RPSAP50-201ENST00000481955 852 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC104685.1-201ENST00000502445 371 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC025445.1-201ENST00000502728 300 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 RNU6-678P-201ENST00000516832 109 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 NPM1P6-201ENST00000521088 871 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHFQ7M4L6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC008033.2-201ENST00000542626 177 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC090502.2-201ENST00000549267 280 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC074051.3-201ENST00000570238 358 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 MTCYBP33-201ENST00000575007 1130 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.11□□□□□ -1.75
SHFQ7M4L6 HSPE1P14-201ENST00000605812 302 ntBASIC4.11□□□□□ -1.75
SHFQ7M4L6 AP001521.1-201ENST00000609150 300 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms