Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 AC006020.1-201ENST00000420179 1854 ntBASIC7.21□□□□□ -1.26
RC3H1Q5TC82 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RC3H1Q5TC82 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.255-201ENST00000364581 97 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.301-201ENST00000364990 103 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.339-201ENST00000365325 102 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.556-201ENST00000384677 113 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AL591416.1-201ENST00000404015 867 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC127526.1-201ENST00000417526 366 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC015977.1-201ENST00000418887 292 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC016027.5-201ENST00000427227 210 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AL160004.2-201ENST00000432935 350 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 MRPS21P3-201ENST00000436696 262 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 SNRPEP7-201ENST00000438350 220 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 TRGVB-201ENST00000453257 471 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 RNU7-63P-201ENST00000459054 62 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC104687.1-201ENST00000485829 412 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC105384.2-201ENST00000508433 640 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC006499.2-201ENST00000513470 337 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 MIR132-201ENST00000591554 101 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 AC245389.1-201ENST00000605141 529 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 CASC19-260ENST00000641828 2001 ntBASIC7.2□□□□□ -1.26
RC3H1Q5TC82 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
RC3H1Q5TC82 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RNA5SP305-201ENST00000362665 119 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RN7SKP115-201ENST00000363177 317 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.574-201ENST00000384766 95 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL109941.1-201ENST00000401925 229 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL136133.1-201ENST00000413694 376 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC093716.1-201ENST00000435923 377 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 TXNP1-201ENST00000441872 371 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL035090.1-201ENST00000454835 332 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RPL35AP28-201ENST00000459730 331 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RN7SL860P-201ENST00000473738 223 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 TRBV8-2-201ENST00000475637 270 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC068522.1-201ENST00000482895 345 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC111193.1-201ENST00000504097 155 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 SNRPCP2-201ENST00000504370 475 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RN7SKP66-201ENST00000516681 231 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AP000676.2-201ENST00000529711 301 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 OR5B10P-201ENST00000532869 642 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms