Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 OR52E6-202ENST00000379946 954 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 PTMAP5-201ENST00000393073 333 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC010385.1-201ENST00000412374 256 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 PTP4A1P5-201ENST00000420305 455 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 ARL2BPP3-201ENST00000421226 480 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 SETD6P1-201ENST00000444575 317 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 RPL21P23-201ENST00000446654 460 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC007967.1-201ENST00000455422 1159 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 CABYRP1-201ENST00000465493 1045 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC146507.1-201ENST00000468335 354 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC108941.1-201ENST00000502853 530 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AL159169.3-201ENST00000608871 561 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 AC066616.2-201ENST00000559334 1481 ntBASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM1Q2M3G4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM1Q2M3G4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM1Q2M3G4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM1Q2M3G4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
SHROOM1Q2M3G4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 SNORD6-201ENST00000365444 73 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 RNU6-356P-201ENST00000384140 107 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 MIR34B-201ENST00000385076 84 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC004022.2-201ENST00000413824 193 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 RPL21P110-201ENST00000433345 446 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC073063.1-201ENST00000434352 607 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC017099.1-201ENST00000448261 1028 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC073387.1-201ENST00000453261 709 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 TVP23BP2-201ENST00000455082 615 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC093014.1-201ENST00000548926 724 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 CBX3P5-201ENST00000552017 521 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC074029.1-201ENST00000552531 1044 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AL390816.3-201ENST00000604527 1066 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AP004607.9-201ENST00000618202 316 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC243756.2-201ENST00000618406 463 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AC243312.2-201ENST00000623340 601 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 AL356094.1-201ENST00000624663 1212 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 ATE1-AS1-202ENST00000636460 506 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SHROOM1Q2M3G4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC004552.1-201ENST00000419089 348 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC245054.1-201ENST00000420944 258 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 RPL7P53-201ENST00000421245 739 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 PTP4A1P3-201ENST00000433661 420 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 NDUFB1P1-201ENST00000435191 180 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AL513321.1-201ENST00000441175 761 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC007000.2-201ENST00000442564 487 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 RPS26P3-201ENST00000470205 348 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC090543.2-201ENST00000483963 348 ntBASIC4.32□□□□□ -1.72
SHROOM1Q2M3G4 AC004057.1-201ENST00000485827 348 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms