| FOXC1 | Q12948 | CR769767.1-201 | ENST00000436337 | 346 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC004866.2-201 | ENST00000438285 | 481 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPL36AP39-201 | ENST00000445859 | 318 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | KRTAP2-5P-201 | ENST00000446109 | 396 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SFTA1P-203 | ENST00000446372 | 693 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MTND6P5-201 | ENST00000448266 | 512 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LINC01810-201 | ENST00000450397 | 411 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | NDUFB4P10-201 | ENST00000452541 | 359 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPL23AP31-201 | ENST00000456160 | 467 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC109925.1-201 | ENST00000478069 | 331 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC021382.1-201 | ENST00000483523 | 359 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RNA5SP340-201 | ENST00000517132 | 107 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC012339.2-201 | ENST00000523996 | 453 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LRTOMT-218 | ENST00000541614 | 726 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC009511.1-201 | ENST00000543527 | 191 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC130371.1-201 | ENST00000577023 | 230 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC020916.2-201 | ENST00000591242 | 360 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | Z83818.1-201 | ENST00000603584 | 150 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC009570.1-201 | ENST00000609599 | 745 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC006023.2-201 | ENST00000609916 | 167 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AL391095.2-201 | ENST00000615228 | 378 nt | TSL 3 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | PROX1-AS1-244 | ENST00000630355 | 599 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LINC01002-206 | ENST00000631772 | 539 nt | TSL 4 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | DTHD1-206 | ENST00000639862 | 3819 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC004158.1-201 | ENST00000564508 | 4319 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AL161756.1-201 | ENST00000555861 | 1751 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SLFN12L-201 | ENST00000260908 | 3119 nt | APPRIS P2 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LINC00184-201 | ENST00000429269 | 2270 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | THAP12P4-201 | ENST00000528321 | 2266 nt | BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | HYAL4-201 | ENST00000223026 | 2407 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | PART1-203 | ENST00000515734 | 2569 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LINC02086-202 | ENST00000492522 | 2091 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | CEP250-202 | ENST00000397527 | 15703 nt | APPRIS P1 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MAGT1-204 | ENST00000610432 | 4019 nt | APPRIS P2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | NBPF12-206 | ENST00000617844 | 6326 nt | APPRIS P2 TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | CDH18-203 | ENST00000502796 | 2386 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | KMT2C-201 | ENST00000262189 | 16862 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | KMT2C-202 | ENST00000355193 | 16858 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | PTPRR-204 | ENST00000440835 | 2818 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | FER-202 | ENST00000438717 | 1531 nt | TSL 2 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | DZIP3-201 | ENST00000361582 | 5350 nt | APPRIS P1 TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | KIF2A-203 | ENST00000407818 | 2315 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | DDAH1-204 | ENST00000535924 | 3909 nt | TSL 1 (best) BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ABLIM1-207 | ENST00000392955 | 7408 nt | TSL 5 BASIC | 6.3 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SORBS1-219 | ENST00000607232 | 4374 nt | APPRIS ALT2 TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | LINC01204-203 | ENST00000609127 | 2900 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | TEAD1-201 | ENST00000334310 | 3075 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | THAP12P7-201 | ENST00000520248 | 2290 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MAPK10-272 | ENST00000641110 | 2724 nt | APPRIS P2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MAPK10-298 | ENST00000641297 | 3040 nt | APPRIS P2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC008147.2-201 | ENST00000552061 | 4713 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | CAP1-206 | ENST00000372805 | 2217 nt | APPRIS P3 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ZNF521-214 | ENST00000584787 | 4327 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | PSD3-219 | ENST00000614430 | 6136 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SNORA58B-201 | ENST00000364259 | 136 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RNU6-441P-201 | ENST00000384545 | 106 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | TRAV8-4-201 | ENST00000390438 | 469 nt | APPRIS P1 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPL24P7-201 | ENST00000399435 | 453 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ABCA12-203 | ENST00000412081 | 485 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC012462.2-201 | ENST00000414756 | 391 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC118754.1-201 | ENST00000416958 | 370 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AL137071.1-201 | ENST00000422150 | 243 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | FAR2P4-202 | ENST00000425399 | 584 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPL37P1-201 | ENST00000432310 | 284 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | Z82198.2-201 | ENST00000434741 | 567 nt | TSL 4 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AL445928.1-201 | ENST00000435545 | 222 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | UBE2V1P13-201 | ENST00000436983 | 439 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC016696.1-201 | ENST00000446949 | 318 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | OARD1-209 | ENST00000471367 | 401 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | NDUFA5-207 | ENST00000471770 | 5608 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MRPL42P6-201 | ENST00000486397 | 371 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPS27P26-201 | ENST00000494583 | 239 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC096577.1-203 | ENST00000506386 | 541 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC010468.2-201 | ENST00000511981 | 438 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ATP5LP3-201 | ENST00000514223 | 304 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RNU6-1338P-201 | ENST00000516328 | 91 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SNORA31.18-201 | ENST00000517043 | 134 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AL133399.1-201 | ENST00000527476 | 298 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC009852.1-201 | ENST00000564058 | 465 nt | TSL 3 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC106782.4-201 | ENST00000568264 | 210 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MIR3135A-201 | ENST00000578460 | 77 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | MIR3176-201 | ENST00000582210 | 90 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | VEZF1-204 | ENST00000584396 | 2342 nt | APPRIS ALT2 TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RPS29P30-201 | ENST00000600975 | 111 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SLC14A1-221 | ENST00000619403 | 3823 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SPRY3-201 | ENST00000302805 | 9019 nt | APPRIS P1 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | RGPD1-201 | ENST00000398193 | 5425 nt | APPRIS ALT2 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ZNF790-201 | ENST00000356725 | 3037 nt | APPRIS P1 TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | TMC3-AS1-206 | ENST00000612811 | 2726 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC007744.1-201 | ENST00000607540 | 2289 nt | TSL 5 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | SLAIN1-202 | ENST00000314070 | 2118 nt | APPRIS ALT2 TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC008676.2-202 | ENST00000509655 | 1992 nt | TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ASCC1-201 | ENST00000317126 | 1501 nt | APPRIS P1 TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | TP63-207 | ENST00000418709 | 2810 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | TRIM51GP-201 | ENST00000534741 | 1350 nt | BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | AC004852.2-201 | ENST00000614289 | 2218 nt | TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | NFAT5-202 | ENST00000354436 | 13229 nt | APPRIS P4 TSL 1 (best) BASIC | 6.29 | □□□□□ -1.4 | | |
| FOXC1 | Q12948 | ERCC6L-202 | ENST00000373657 | 4344 nt | APPRIS ALT2 TSL 2 BASIC | 6.29 | □□□□□ -1.4 | | |