Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
CCL20P78556 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL20P78556 XKRYP4-201ENST00000414395 483 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC234782.4-201ENST00000417646 1048 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCL20P78556 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL20P78556 AL139247.1-201ENST00000422768 325 ntBASIC2.66□□□□□ -1.98
CCL20P78556 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 RPL12P11-201ENST00000439970 501 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 XKRYP5-201ENST00000449659 483 ntBASIC2.66□□□□□ -1.98
CCL20P78556 PPIAP20-201ENST00000449839 135 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC115115.1-201ENST00000449927 248 ntBASIC2.66□□□□□ -1.98
CCL20P78556 RPL37P3-201ENST00000456825 293 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC096992.1-201ENST00000459808 709 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC091564.1-201ENST00000464563 479 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC146507.1-201ENST00000468335 354 ntBASIC2.66□□□□□ -1.98
CCL20P78556 RPL21P18-201ENST00000469899 480 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL20P78556 AC093840.1-201ENST00000511599 336 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC093755.1-201ENST00000512950 1023 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.66□□□□□ -1.98
CCL20P78556 IGKV2-36-201ENST00000519999 223 ntBASIC2.66□□□□□ -1.98
CCL20P78556 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL20P78556 OR4V1P-201ENST00000525394 1140 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.66□□□□□ -1.98
CCL20P78556 CENPUP2-201ENST00000555897 1186 ntBASIC2.66□□□□□ -1.98
CCL20P78556 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.66□□□□□ -1.98
CCL20P78556 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 XIST_intron.1-201ENST00000619444 68 ntBASIC2.66□□□□□ -1.98
CCL20P78556 AC022079.2-201ENST00000619739 566 ntBASIC2.66□□□□□ -1.98
CCL20P78556 MIR6500-201ENST00000622700 86 ntBASIC2.66□□□□□ -1.98
CCL20P78556 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL20P78556 SNORA50A-202ENST00000629536 136 ntBASIC2.66□□□□□ -1.98
CCL20P78556 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCL20P78556 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL20P78556 CIR1P2-201ENST00000514821 1342 ntBASIC2.66□□□□□ -1.98
CCL20P78556 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.65□□□□□ -1.98
CCL20P78556 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCL20P78556 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCL20P78556 MTND5P24-201ENST00000438892 1767 ntBASIC2.65□□□□□ -1.99
CCL20P78556 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.65□□□□□ -1.99
CCL20P78556 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 RNU6-452P-201ENST00000384406 107 ntBASIC2.65□□□□□ -1.99
CCL20P78556 MIR550A3-201ENST00000390735 95 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC092642.1-201ENST00000392417 425 ntBASIC2.65□□□□□ -1.99
CCL20P78556 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCL20P78556 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 RPL32P35-201ENST00000415214 394 ntBASIC2.65□□□□□ -1.99
CCL20P78556 DBIP2-201ENST00000419076 262 ntBASIC2.65□□□□□ -1.99
CCL20P78556 MTND2P16-201ENST00000419987 799 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC241520.1-201ENST00000422654 1099 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 CKS1BP5-201ENST00000434172 273 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC006466.1-201ENST00000438721 289 ntBASIC2.65□□□□□ -1.99
CCL20P78556 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 GAPDHP27-201ENST00000447427 1020 ntBASIC2.65□□□□□ -1.99
CCL20P78556 RPL29P29-201ENST00000448725 423 ntBASIC2.65□□□□□ -1.99
CCL20P78556 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 PLGLA-201ENST00000465668 449 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC093267.1-201ENST00000489176 961 ntBASIC2.65□□□□□ -1.99
CCL20P78556 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 HMGB3P15-201ENST00000507326 574 ntBASIC2.65□□□□□ -1.99
CCL20P78556 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 AC010265.1-201ENST00000513509 211 ntBASIC2.65□□□□□ -1.99
CCL20P78556 RNA5SP385-201ENST00000515947 110 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 IGHV3-76-201ENST00000522465 295 ntBASIC2.65□□□□□ -1.99
CCL20P78556 OR8L1P-201ENST00000534005 955 ntBASIC2.65□□□□□ -1.99
CCL20P78556 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCL20P78556 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.65□□□□□ -1.99
CCL20P78556 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AC044860.2-201ENST00000561005 179 ntBASIC2.65□□□□□ -1.99
CCL20P78556 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AC011468.4-201ENST00000603942 409 ntBASIC2.65□□□□□ -1.99
CCL20P78556 ARF4P1-201ENST00000605447 541 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL20P78556 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 SDR42E1P1-201ENST00000611327 477 ntBASIC2.65□□□□□ -1.99
CCL20P78556 MIR8058-201ENST00000615737 89 ntBASIC2.65□□□□□ -1.99
CCL20P78556 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 MIR6886-201ENST00000619864 61 ntBASIC2.65□□□□□ -1.99
CCL20P78556 U4.6-201ENST00000621618 127 ntBASIC2.65□□□□□ -1.99
CCL20P78556 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL20P78556 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL20P78556 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCL20P78556 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms