Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.03□□□□□ -1.92
UBA52P62987 AL691447.1-201ENST00000419456 387 ntBASIC3.03□□□□□ -1.92
UBA52P62987 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 NDUFB1P1-201ENST00000435191 180 ntBASIC3.03□□□□□ -1.92
UBA52P62987 MTCYBP31-201ENST00000438855 1122 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC006480.1-201ENST00000449887 378 ntBASIC3.03□□□□□ -1.92
UBA52P62987 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.03□□□□□ -1.92
UBA52P62987 HMGB3P21-201ENST00000452483 547 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 AC005726.1-201ENST00000494679 427 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC108941.1-201ENST00000502853 530 ntBASIC3.03□□□□□ -1.92
UBA52P62987 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.03□□□□□ -1.92
UBA52P62987 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.03□□□□□ -1.92
UBA52P62987 OR5B10P-201ENST00000532869 642 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC006960.3-201ENST00000561845 705 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.03□□□□□ -1.92
UBA52P62987 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 AF131215.7-201ENST00000602443 707 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AL163642.2-201ENST00000604722 1019 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AL354760.1-201ENST00000608357 643 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC022149.2-201ENST00000621061 203 ntBASIC3.03□□□□□ -1.92
UBA52P62987 AC243312.2-201ENST00000623340 601 ntBASIC3.03□□□□□ -1.92
UBA52P62987 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 SRP72P2-201ENST00000344851 1979 ntBASIC3.03□□□□□ -1.92
UBA52P62987 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
UBA52P62987 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
UBA52P62987 RNA5SP42-201ENST00000364278 115 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AL136131.1-201ENST00000406079 803 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AL513174.1-201ENST00000423182 629 ntBASIC3.02□□□□□ -1.93
UBA52P62987 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.02□□□□□ -1.93
UBA52P62987 AL353093.1-201ENST00000441292 436 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 CASP3P1-201ENST00000446037 609 ntBASIC3.02□□□□□ -1.93
UBA52P62987 RPL21P23-201ENST00000446654 460 ntBASIC3.02□□□□□ -1.93
UBA52P62987 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 CLIC4P1-201ENST00000453177 535 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AC007967.1-201ENST00000455422 1159 ntBASIC3.02□□□□□ -1.93
UBA52P62987 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.02□□□□□ -1.93
UBA52P62987 AC021205.2-201ENST00000480069 347 ntBASIC3.02□□□□□ -1.93
UBA52P62987 RAC1P2-201ENST00000511164 579 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.02□□□□□ -1.93
UBA52P62987 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 AP000926.4-201ENST00000527351 454 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 RPL21P12-201ENST00000559810 515 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.02□□□□□ -1.93
UBA52P62987 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.02□□□□□ -1.93
UBA52P62987 AL135786.2-201ENST00000608422 615 ntBASIC3.02□□□□□ -1.93
UBA52P62987 AC243654.2-201ENST00000612843 443 ntBASIC3.02□□□□□ -1.93
UBA52P62987 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.02□□□□□ -1.93
UBA52P62987 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.02□□□□□ -1.93
UBA52P62987 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.02□□□□□ -1.93
UBA52P62987 AC007823.1-201ENST00000569932 1566 ntBASIC3.02□□□□□ -1.93
UBA52P62987 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.02□□□□□ -1.93
UBA52P62987 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
UBA52P62987 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
UBA52P62987 SYT14P1-202ENST00000600441 1448 ntBASIC3.02□□□□□ -1.93
UBA52P62987 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
UBA52P62987 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
UBA52P62987 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
UBA52P62987 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 OR52E6-202ENST00000379946 954 ntBASIC3.01□□□□□ -1.93
UBA52P62987 Z92545.1-201ENST00000411782 234 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AC007390.1-201ENST00000415722 356 ntBASIC3.01□□□□□ -1.93
UBA52P62987 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
UBA52P62987 SNORD105B-201ENST00000458770 79 ntBASIC3.01□□□□□ -1.93
UBA52P62987 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.01□□□□□ -1.93
UBA52P62987 RPL32P34-201ENST00000486380 400 ntBASIC3.01□□□□□ -1.93
UBA52P62987 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.01□□□□□ -1.93
UBA52P62987 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.01□□□□□ -1.93
UBA52P62987 SNORA70.17-201ENST00000516449 133 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AC245166.1-201ENST00000521012 253 ntBASIC3.01□□□□□ -1.93
UBA52P62987 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms