Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
VBP1P61758 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.16□□□□□ -1.9
VBP1P61758 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VBP1P61758 ENSAP1-201ENST00000392855 326 ntBASIC3.16□□□□□ -1.9
VBP1P61758 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.16□□□□□ -1.9
VBP1P61758 RN7SKP53-201ENST00000411337 315 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 RPL23AP38-201ENST00000423801 469 ntBASIC3.16□□□□□ -1.9
VBP1P61758 RPL23AP82-202ENST00000427528 469 ntBASIC3.16□□□□□ -1.9
VBP1P61758 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 ISCA1P2-201ENST00000438679 421 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 CENPBD1P1-201ENST00000464061 469 ntBASIC3.16□□□□□ -1.9
VBP1P61758 OR5H3P-201ENST00000502817 919 ntBASIC3.16□□□□□ -1.9
VBP1P61758 KCTD9P5-201ENST00000504141 1170 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
VBP1P61758 OR4R3P-201ENST00000525084 838 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 RN7SL600P-201ENST00000581811 299 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AC078899.3-201ENST00000599065 212 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AC011472.4-201ENST00000615848 491 ntBASIC3.16□□□□□ -1.9
VBP1P61758 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.16□□□□□ -1.9
VBP1P61758 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.16□□□□□ -1.9
VBP1P61758 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.16□□□□□ -1.9
VBP1P61758 AL392088.2-201ENST00000637607 285 ntBASIC3.16□□□□□ -1.9
VBP1P61758 MIR4302-201ENST00000638058 60 ntBASIC3.16□□□□□ -1.9
VBP1P61758 AP000553.6-201ENST00000641242 118 ntBASIC3.16□□□□□ -1.9
VBP1P61758 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VBP1P61758 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VBP1P61758 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.16□□□□□ -1.9
VBP1P61758 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
VBP1P61758 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.9
VBP1P61758 RNA5SP447-201ENST00000363749 119 ntBASIC3.15□□□□□ -1.91
VBP1P61758 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
VBP1P61758 AL583834.1-201ENST00000406943 343 ntBASIC3.15□□□□□ -1.91
VBP1P61758 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.15□□□□□ -1.91
VBP1P61758 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.15□□□□□ -1.91
VBP1P61758 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.15□□□□□ -1.91
VBP1P61758 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.15□□□□□ -1.91
VBP1P61758 AC010655.1-201ENST00000449336 292 ntBASIC3.15□□□□□ -1.91
VBP1P61758 RPL36AP33-201ENST00000450395 310 ntBASIC3.15□□□□□ -1.91
VBP1P61758 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.15□□□□□ -1.91
VBP1P61758 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.15□□□□□ -1.91
VBP1P61758 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
VBP1P61758 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.15□□□□□ -1.91
VBP1P61758 RNU6-1073P-201ENST00000517182 106 ntBASIC3.15□□□□□ -1.91
VBP1P61758 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VBP1P61758 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.15□□□□□ -1.91
VBP1P61758 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.15□□□□□ -1.91
VBP1P61758 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.15□□□□□ -1.91
VBP1P61758 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.15□□□□□ -1.91
VBP1P61758 FAM25E-202ENST00000608562 189 ntBASIC3.15□□□□□ -1.91
VBP1P61758 AC019193.2-201ENST00000610012 634 ntBASIC3.15□□□□□ -1.91
VBP1P61758 AL161616.1-201ENST00000611867 286 ntBASIC3.15□□□□□ -1.91
VBP1P61758 AC231759.1-201ENST00000616455 597 ntBASIC3.15□□□□□ -1.91
VBP1P61758 MIR6826-201ENST00000617808 98 ntBASIC3.15□□□□□ -1.91
VBP1P61758 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.15□□□□□ -1.91
VBP1P61758 FAM157B-203ENST00000639350 358 ntBASIC3.15□□□□□ -1.91
VBP1P61758 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VBP1P61758 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.15□□□□□ -1.91
VBP1P61758 XPOTP1-201ENST00000443317 2398 ntBASIC3.15□□□□□ -1.91
VBP1P61758 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 ELL2P4-201ENST00000446870 1376 ntBASIC3.14□□□□□ -1.91
VBP1P61758 RPS3AP23-201ENST00000401762 784 ntBASIC3.14□□□□□ -1.91
VBP1P61758 RPS27AP11-201ENST00000402798 447 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.14□□□□□ -1.91
VBP1P61758 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 MRPL50P2-201ENST00000416821 482 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 SETD6P1-201ENST00000444575 317 ntBASIC3.14□□□□□ -1.91
VBP1P61758 BUD31P2-201ENST00000449374 300 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AL513533.1-201ENST00000453728 415 ntBASIC3.14□□□□□ -1.91
VBP1P61758 RN7SL303P-201ENST00000469773 251 ntBASIC3.14□□□□□ -1.91
VBP1P61758 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.14□□□□□ -1.91
VBP1P61758 AL136126.1-201ENST00000473603 402 ntBASIC3.14□□□□□ -1.91
VBP1P61758 RPS4XP15-201ENST00000489210 795 ntBASIC3.14□□□□□ -1.91
VBP1P61758 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
VBP1P61758 RNU1-61P-201ENST00000516107 151 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.14□□□□□ -1.91
VBP1P61758 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.14□□□□□ -1.91
VBP1P61758 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VBP1P61758 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.14□□□□□ -1.91
VBP1P61758 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
VBP1P61758 MIR4436B2-201ENST00000581415 91 ntBASIC3.14□□□□□ -1.91
VBP1P61758 MIR4436B1-201ENST00000583272 91 ntBASIC3.14□□□□□ -1.91
VBP1P61758 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.14□□□□□ -1.91
VBP1P61758 AC015726.1-201ENST00000602353 681 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms