Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC006960.3-201ENST00000561845 705 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.2□□□□□ -1.9
ACTBP60709 AP000919.1-202ENST00000581139 1264 ntBASIC3.2□□□□□ -1.9
ACTBP60709 MIR548Y-201ENST00000582739 110 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.2□□□□□ -1.9
ACTBP60709 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AL365400.2-201ENST00000605604 902 ntBASIC3.2□□□□□ -1.9
ACTBP60709 AC012557.1-201ENST00000607115 611 ntBASIC3.2□□□□□ -1.9
ACTBP60709 RLIMP1-201ENST00000339626 1680 ntBASIC3.2□□□□□ -1.9
ACTBP60709 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.19□□□□□ -1.9
ACTBP60709 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
ACTBP60709 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ACTBP60709 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 RNU6-244P-201ENST00000391028 104 ntBASIC3.19□□□□□ -1.9
ACTBP60709 RPL21P65-201ENST00000406094 466 ntBASIC3.19□□□□□ -1.9
ACTBP60709 RNU4-6P-201ENST00000410804 122 ntBASIC3.19□□□□□ -1.9
ACTBP60709 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
ACTBP60709 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
ACTBP60709 OR8G2P-201ENST00000412796 908 ntBASIC3.19□□□□□ -1.9
ACTBP60709 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 AL356095.1-201ENST00000417217 199 ntBASIC3.19□□□□□ -1.9
ACTBP60709 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.19□□□□□ -1.9
ACTBP60709 ARL5AP3-201ENST00000439327 386 ntBASIC3.19□□□□□ -1.9
ACTBP60709 HMGB3P14-201ENST00000494195 599 ntBASIC3.19□□□□□ -1.9
ACTBP60709 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 RAC1P2-201ENST00000511164 579 ntBASIC3.19□□□□□ -1.9
ACTBP60709 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 AP000926.4-201ENST00000527351 454 ntBASIC3.19□□□□□ -1.9
ACTBP60709 YPEL5P3-201ENST00000547227 352 ntBASIC3.19□□□□□ -1.9
ACTBP60709 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.19□□□□□ -1.9
ACTBP60709 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 AP005901.4-201ENST00000577336 569 ntBASIC3.19□□□□□ -1.9
ACTBP60709 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 AL590392.1-201ENST00000604960 446 ntBASIC3.19□□□□□ -1.9
ACTBP60709 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.19□□□□□ -1.9
ACTBP60709 MIR6867-201ENST00000610636 67 ntBASIC3.19□□□□□ -1.9
ACTBP60709 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 CDRT1-208ENST00000630868 794 ntBASIC3.19□□□□□ -1.9
ACTBP60709 FAM157B-203ENST00000639350 358 ntBASIC3.19□□□□□ -1.9
ACTBP60709 AL732372.2-225ENST00000642124 456 ntBASIC3.19□□□□□ -1.9
ACTBP60709 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
ACTBP60709 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.19□□□□□ -1.9
ACTBP60709 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACTBP60709 MTND4P31-201ENST00000425607 1343 ntBASIC3.19□□□□□ -1.9
ACTBP60709 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 AC022031.1-201ENST00000585985 2593 ntBASIC3.18□□□□□ -1.9
ACTBP60709 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 AC007496.3-201ENST00000624987 3443 ntBASIC3.18□□□□□ -1.9
ACTBP60709 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ACTBP60709 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP97-201ENST00000365006 84 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP235-201ENST00000365411 114 ntBASIC3.18□□□□□ -1.9
ACTBP60709 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.18□□□□□ -1.9
ACTBP60709 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
ACTBP60709 AC068538.1-201ENST00000376856 336 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP424-201ENST00000390988 115 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AL355379.1-201ENST00000405542 640 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP317-201ENST00000410176 116 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP311-201ENST00000411290 116 ntBASIC3.18□□□□□ -1.9
ACTBP60709 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.18□□□□□ -1.9
ACTBP60709 Z97055.1-201ENST00000419730 712 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 C1DP3-201ENST00000455013 423 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.18□□□□□ -1.9
ACTBP60709 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 U3.44-201ENST00000458938 192 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC096992.1-201ENST00000459808 709 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC010468.1-201ENST00000461022 817 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RPL6P9-201ENST00000466502 859 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC087312.1-201ENST00000471411 480 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.18□□□□□ -1.9
ACTBP60709 RPL23AP44-201ENST00000482216 473 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.18□□□□□ -1.9
ACTBP60709 PHBP14-201ENST00000512887 367 ntBASIC3.18□□□□□ -1.9
ACTBP60709 MTCO1P35-201ENST00000515270 228 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP315-201ENST00000516340 116 ntBASIC3.18□□□□□ -1.9
ACTBP60709 RNA5SP312-201ENST00000517068 116 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.18□□□□□ -1.9
ACTBP60709 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ACTBP60709 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.18□□□□□ -1.9
ACTBP60709 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACTBP60709 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.18□□□□□ -1.9
ACTBP60709 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms