Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX1P48742 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.21□□□□□ -1.74
LHX1P48742 BPTFP1-201ENST00000579209 492 ntBASIC4.21□□□□□ -1.74
LHX1P48742 AC245884.10-201ENST00000597355 337 ntBASIC4.21□□□□□ -1.74
LHX1P48742 AC112220.2-201ENST00000605513 533 ntBASIC4.21□□□□□ -1.74
LHX1P48742 VN1R7P-201ENST00000619242 903 ntBASIC4.21□□□□□ -1.74
LHX1P48742 AL773545.4-201ENST00000637262 310 ntBASIC4.21□□□□□ -1.74
LHX1P48742 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.21□□□□□ -1.74
LHX1P48742 AL513478.4-201ENST00000641636 310 ntBASIC4.21□□□□□ -1.74
LHX1P48742 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 KPNA2P2-201ENST00000419546 1489 ntBASIC4.21□□□□□ -1.74
LHX1P48742 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.21□□□□□ -1.74
LHX1P48742 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
LHX1P48742 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.74
LHX1P48742 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LHX1P48742 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
LHX1P48742 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LHX1P48742 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.21□□□□□ -1.74
LHX1P48742 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LHX1P48742 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 AC007529.1-201ENST00000418574 2178 ntBASIC4.2□□□□□ -1.74
LHX1P48742 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 RNA5SP391-201ENST00000363456 119 ntBASIC4.2□□□□□ -1.74
LHX1P48742 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 MIR16-1-201ENST00000385271 89 ntBASIC4.2□□□□□ -1.74
LHX1P48742 MIR708-201ENST00000390708 88 ntBASIC4.2□□□□□ -1.74
LHX1P48742 Y_RNA.578-201ENST00000390903 88 ntBASIC4.2□□□□□ -1.74
LHX1P48742 PRRC2CP1-201ENST00000404428 159 ntBASIC4.2□□□□□ -1.74
LHX1P48742 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 AL160275.2-201ENST00000412010 394 ntBASIC4.2□□□□□ -1.74
LHX1P48742 MTND4P3-201ENST00000417829 541 ntBASIC4.2□□□□□ -1.74
LHX1P48742 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 Z97055.1-201ENST00000419730 712 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AL138785.1-201ENST00000425821 331 ntBASIC4.2□□□□□ -1.74
LHX1P48742 HMGB3P5-201ENST00000428894 612 ntBASIC4.2□□□□□ -1.74
LHX1P48742 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 AC023347.2-201ENST00000433994 462 ntBASIC4.2□□□□□ -1.74
LHX1P48742 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.2□□□□□ -1.74
LHX1P48742 AC083863.1-201ENST00000438811 231 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.2□□□□□ -1.74
LHX1P48742 RPL23AP15-201ENST00000450202 459 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 HMGB3P21-201ENST00000452483 547 ntBASIC4.2□□□□□ -1.74
LHX1P48742 FGF7P3-201ENST00000454645 303 ntBASIC4.2□□□□□ -1.74
LHX1P48742 TVP23BP2-201ENST00000455082 615 ntBASIC4.2□□□□□ -1.74
LHX1P48742 OR9M1P-201ENST00000459641 921 ntBASIC4.2□□□□□ -1.74
LHX1P48742 RPL5P30-201ENST00000465511 891 ntBASIC4.2□□□□□ -1.74
LHX1P48742 PPIAP15-201ENST00000479662 484 ntBASIC4.2□□□□□ -1.74
LHX1P48742 UBA52P3-201ENST00000491303 382 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC025554.1-201ENST00000505641 188 ntBASIC4.2□□□□□ -1.74
LHX1P48742 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 SNORD116-26-201ENST00000516006 96 ntBASIC4.2□□□□□ -1.74
LHX1P48742 RN7SKP96-201ENST00000516948 297 ntBASIC4.2□□□□□ -1.74
LHX1P48742 snoZ278.1-201ENST00000517059 112 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AF279873.1-201ENST00000523393 313 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 CYCSP30-201ENST00000546447 172 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.2□□□□□ -1.74
LHX1P48742 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.2□□□□□ -1.74
LHX1P48742 SERPINE4P-201ENST00000554978 281 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.2□□□□□ -1.74
LHX1P48742 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LHX1P48742 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LHX1P48742 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AP003485.1-201ENST00000625093 753 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.2□□□□□ -1.74
LHX1P48742 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LHX1P48742 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LHX1P48742 SGO1P1-201ENST00000603525 1447 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AC097504.1-201ENST00000515103 2415 ntBASIC4.2□□□□□ -1.74
LHX1P48742 AL356489.2-201ENST00000566968 3528 ntBASIC4.19□□□□□ -1.74
LHX1P48742 FAM91A3P-201ENST00000456826 2544 ntBASIC4.19□□□□□ -1.74
LHX1P48742 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
LHX1P48742 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LHX1P48742 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LHX1P48742 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.19□□□□□ -1.74
LHX1P48742 OR1L1-202ENST00000373686 1083 ntBASIC4.19□□□□□ -1.74
LHX1P48742 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
LHX1P48742 MTCO2P31-201ENST00000402702 684 ntBASIC4.19□□□□□ -1.74
LHX1P48742 RPS7P9-201ENST00000414704 586 ntBASIC4.19□□□□□ -1.74
LHX1P48742 PAICSP7-201ENST00000419829 962 ntBASIC4.19□□□□□ -1.74
LHX1P48742 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LHX1P48742 RPL30P3-201ENST00000424262 333 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms