Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 SNORA71B-202ENST00000439232 272 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC104689.1-201ENST00000473356 768 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 RN7SKP209-201ENST00000516888 304 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 RNU6-352P-201ENST00000516908 107 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 SOD1P3-201ENST00000518682 454 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC092747.2-201ENST00000545069 983 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC090751.1-201ENST00000566966 267 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL390816.3-201ENST00000604527 1066 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC135178.6-201ENST00000605314 398 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC015849.2-201ENST00000605738 409 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL450270.1-201ENST00000606160 391 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC121761.2-201ENST00000617300 689 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC090617.9-201ENST00000623751 147 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC020978.9-201ENST00000624380 1141 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 NSRP1P1-201ENST00000444067 1693 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 SEPT7P7-201ENST00000420492 1301 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC119744.1-201ENST00000454746 1715 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 AC000367.1-201ENST00000452711 1766 ntBASIC3.35□□□□□ -1.87
CSNK1A1P48729 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSNK1A1P48729 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CSNK1A1P48729 XPOTP1-201ENST00000443317 2398 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSNK1A1P48729 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSNK1A1P48729 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSNK1A1P48729 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSNK1A1P48729 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 HMGN2P8-201ENST00000391458 268 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 UBE2V1P15-201ENST00000407776 448 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RNU2-21P-201ENST00000410368 188 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 MTCO3P4-201ENST00000419236 787 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL035458.1-201ENST00000433096 585 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 RPS29P7-201ENST00000439662 171 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RPS7P5-201ENST00000441482 581 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 RPS20P32-201ENST00000456044 356 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 CFTRP1-201ENST00000456646 183 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RPL7L1P8-201ENST00000469911 741 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 GAPDHP36-201ENST00000480688 918 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC093755.1-201ENST00000512950 1023 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RN7SKP141-201ENST00000516167 338 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RNU2-58P-201ENST00000516403 183 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC103833.1-201ENST00000517442 172 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 SNRPGP1-201ENST00000553864 222 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 ZNF192P1-203ENST00000565888 810 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 MIR3160-1-201ENST00000577972 85 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 RN7SL703P-201ENST00000578485 302 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AC022916.3-201ENST00000592961 742 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 OR4H6P-202ENST00000603819 340 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL163642.2-201ENST00000604722 1019 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 HPVC1-201ENST00000629899 1198 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 MIR4278-201ENST00000636094 69 ntBASIC3.34□□□□□ -1.87
CSNK1A1P48729 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.34□□□□□ -1.87
CSNK1A1P48729 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSNK1A1P48729 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.34□□□□□ -1.88
CSNK1A1P48729 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.34□□□□□ -1.88
CSNK1A1P48729 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
CSNK1A1P48729 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSNK1A1P48729 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms