Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 AL390726.5-202ENST00000564800 256 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC233702.9-201ENST00000581528 203 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX2P48431 MIR4637-201ENST00000582405 84 ntBASIC4.27□□□□□ -1.73
SOX2P48431 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 AC087783.2-201ENST00000605070 562 ntBASIC4.27□□□□□ -1.73
SOX2P48431 IMMP1LP1-201ENST00000605170 488 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 AC087241.4-201ENST00000612441 480 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC078899.5-201ENST00000612475 178 ntBASIC4.27□□□□□ -1.73
SOX2P48431 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 AP002505.2-201ENST00000623585 696 ntBASIC4.27□□□□□ -1.73
SOX2P48431 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
SOX2P48431 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 AC027514.1-201ENST00000588561 1603 ntBASIC4.27□□□□□ -1.73
SOX2P48431 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX2P48431 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 Y_RNA.3-201ENST00000362331 103 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RNU5F-6P-201ENST00000362979 116 ntBASIC4.26□□□□□ -1.73
SOX2P48431 U3.2-201ENST00000362981 210 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RNA5SP391-201ENST00000363456 119 ntBASIC4.26□□□□□ -1.73
SOX2P48431 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 AC019155.1-201ENST00000382242 574 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RNU6-1215P-201ENST00000384441 102 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL121972.1-201ENST00000402023 252 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL357515.1-201ENST00000402967 542 ntBASIC4.26□□□□□ -1.73
SOX2P48431 DUTP5-201ENST00000406790 469 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RPL31P52-201ENST00000407532 367 ntBASIC4.26□□□□□ -1.73
SOX2P48431 VN1R8P-201ENST00000407739 893 ntBASIC4.26□□□□□ -1.73
SOX2P48431 U3.35-201ENST00000408405 208 ntBASIC4.26□□□□□ -1.73
SOX2P48431 MIR1282-201ENST00000408865 101 ntBASIC4.26□□□□□ -1.73
SOX2P48431 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 EIF4A1P3-201ENST00000411521 244 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC109780.2-201ENST00000413467 845 ntBASIC4.26□□□□□ -1.73
SOX2P48431 ELOCP17-201ENST00000414751 326 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX2P48431 RPS27AP14-201ENST00000422868 454 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC096632.1-201ENST00000427395 310 ntBASIC4.26□□□□□ -1.73
SOX2P48431 C8orf59P1-201ENST00000429930 303 ntBASIC4.26□□□□□ -1.73
SOX2P48431 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 AC023347.2-201ENST00000433994 462 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.26□□□□□ -1.73
SOX2P48431 MTND1P28-201ENST00000435623 950 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 SNRPEP7-201ENST00000438350 220 ntBASIC4.26□□□□□ -1.73
SOX2P48431 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 RPS26P2-201ENST00000440331 348 ntBASIC4.26□□□□□ -1.73
SOX2P48431 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 MRPL48P1-201ENST00000445390 636 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL445433.1-201ENST00000457507 257 ntBASIC4.26□□□□□ -1.73
SOX2P48431 APOOP2-201ENST00000461561 539 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX2P48431 RPS15AP17-201ENST00000470598 390 ntBASIC4.26□□□□□ -1.73
SOX2P48431 PPIAP19-201ENST00000486414 492 ntBASIC4.26□□□□□ -1.73
SOX2P48431 FAM172BP-201ENST00000487497 1089 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RN7SL346P-201ENST00000491561 294 ntBASIC4.26□□□□□ -1.73
SOX2P48431 RPS4XP18-201ENST00000495480 763 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 FTH1P24-201ENST00000503502 462 ntBASIC4.26□□□□□ -1.73
SOX2P48431 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SOX2P48431 PGAM1P13-201ENST00000507497 754 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 AC018797.3-201ENST00000513388 1241 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AF186190.1-201ENST00000517470 480 ntBASIC4.26□□□□□ -1.73
SOX2P48431 MTND1P5-201ENST00000517906 940 ntBASIC4.26□□□□□ -1.73
SOX2P48431 IGHV3-32-201ENST00000519182 355 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.26□□□□□ -1.73
SOX2P48431 ZNF705CP-201ENST00000530515 889 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AL139174.1-201ENST00000531489 886 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX2P48431 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX2P48431 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.26□□□□□ -1.73
SOX2P48431 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.26□□□□□ -1.73
SOX2P48431 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.26□□□□□ -1.73
SOX2P48431 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.26□□□□□ -1.73
SOX2P48431 EIF1P4-201ENST00000572664 335 ntBASIC4.26□□□□□ -1.73
SOX2P48431 AC141257.3-201ENST00000572906 215 ntBASIC4.26□□□□□ -1.73
SOX2P48431 MIR5186-201ENST00000577504 120 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms