Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU6-232P-201ENST00000517144 64 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 MTCO1P49-201ENST00000523429 802 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 AC133555.2-201ENST00000550213 292 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD12P35452 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXD12P35452 AC018695.5-201ENST00000605872 315 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AL139418.1-201ENST00000613613 177 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 AC079248.2-201ENST00000623779 326 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC068724.3-201ENST00000625906 87 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC068620.4-201ENST00000636730 1182 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXD12P35452 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD12P35452 MAPK10-303ENST00000641324 3959 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 AC107081.3-201ENST00000612715 2034 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
HOXD12P35452 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD12P35452 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 ZNF542P-204ENST00000482727 1305 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 ELL2P3-201ENST00000457883 1602 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD12P35452 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 MUC2-202ENST00000613187 4845 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC006971.1-201ENST00000407916 4486 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
HOXD12P35452 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 SNORA73.1-201ENST00000363107 205 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 Y_RNA.126-201ENST00000363382 111 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HOXD12P35452 SNORD116-9-201ENST00000384000 95 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 SNORD116-3-201ENST00000384287 95 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 SNORD116-7-201ENST00000384404 95 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 SNORD116-5-201ENST00000384462 95 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 SNORA70E-201ENST00000384492 135 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 MIR1193-201ENST00000408109 78 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 RNU2-21P-201ENST00000410368 188 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 RNA5SP80-201ENST00000410475 111 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 RN7SKP27-201ENST00000410684 333 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 LINC00993-201ENST00000420453 540 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 UQCRBP1-201ENST00000421129 336 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AL732292.1-201ENST00000426692 226 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD12P35452 THAP5P1-201ENST00000439089 262 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC118469.1-201ENST00000442943 488 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 H2AFZP5-201ENST00000446960 382 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 MTND1P29-201ENST00000448112 647 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 PPIAP3-201ENST00000450588 505 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 NDUFS5P3-201ENST00000450668 321 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD12P35452 BZW1P2-201ENST00000473537 826 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 MTND3P7-201ENST00000474435 343 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 DEFB109F-201ENST00000491870 277 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC012170.1-201ENST00000495139 359 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 NIFKP7-201ENST00000503365 834 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 SNX5P1-201ENST00000505757 1041 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC111000.2-201ENST00000507775 550 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 XKRY-201ENST00000510392 1100 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 VWA8P1-201ENST00000510889 176 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC117532.1-201ENST00000514638 323 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC087808.1-201ENST00000520501 361 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXD12P35452 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD12P35452 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC116553.2-201ENST00000564203 463 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AC069061.3-201ENST00000582254 823 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC090616.2-202ENST00000584248 222 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 NBR2-204ENST00000587322 63 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC006539.2-201ENST00000601729 572 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AP003973.1-201ENST00000604639 691 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AL163642.2-201ENST00000604722 1019 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC105129.3-201ENST00000605455 485 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AC124312.4-201ENST00000605533 310 ntBASIC4.76□□□□□ -1.65
HOXD12P35452 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD12P35452 AL354976.1-201ENST00000613843 387 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms