Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.49□□□□□ -1.85
RPA3P35244 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
RPA3P35244 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.49□□□□□ -1.85
RPA3P35244 HMGN1P18-201ENST00000457642 277 ntBASIC3.49□□□□□ -1.85
RPA3P35244 FTH1P24-201ENST00000503502 462 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC021146.5-201ENST00000503544 545 ntBASIC3.49□□□□□ -1.85
RPA3P35244 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.49□□□□□ -1.85
RPA3P35244 AC147055.1-201ENST00000509261 750 ntBASIC3.49□□□□□ -1.85
RPA3P35244 MTCO3P42-201ENST00000509488 518 ntBASIC3.49□□□□□ -1.85
RPA3P35244 SAP18P1-201ENST00000512058 390 ntBASIC3.49□□□□□ -1.85
RPA3P35244 MTCO3P39-201ENST00000514812 518 ntBASIC3.49□□□□□ -1.85
RPA3P35244 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.49□□□□□ -1.85
RPA3P35244 RANP9-201ENST00000519957 271 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.49□□□□□ -1.85
RPA3P35244 AC104027.1-201ENST00000521887 300 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.49□□□□□ -1.85
RPA3P35244 AC006518.1-201ENST00000541449 943 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
RPA3P35244 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.49□□□□□ -1.85
RPA3P35244 AL049844.2-201ENST00000604280 628 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC009948.4-201ENST00000604692 675 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC090525.3-201ENST00000605601 189 ntBASIC3.49□□□□□ -1.85
RPA3P35244 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.49□□□□□ -1.85
RPA3P35244 AC112200.1-201ENST00000625015 234 ntBASIC3.49□□□□□ -1.85
RPA3P35244 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RPA3P35244 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RPA3P35244 AC007496.3-201ENST00000624987 3443 ntBASIC3.48□□□□□ -1.85
RPA3P35244 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 PNPT1P2-201ENST00000456768 2050 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC090337.1-201ENST00000579651 2074 ntBASIC3.48□□□□□ -1.85
RPA3P35244 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
RPA3P35244 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.48□□□□□ -1.85
RPA3P35244 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
RPA3P35244 RAB9AP3-201ENST00000412737 573 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 AL159169.1-201ENST00000421119 127 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 RPL23AP82-202ENST00000427528 469 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.48□□□□□ -1.85
RPA3P35244 CBX1P4-201ENST00000439415 457 ntBASIC3.48□□□□□ -1.85
RPA3P35244 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 RAB9AP1-201ENST00000449393 573 ntBASIC3.48□□□□□ -1.85
RPA3P35244 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.48□□□□□ -1.85
RPA3P35244 SNORD105B-201ENST00000458770 79 ntBASIC3.48□□□□□ -1.85
RPA3P35244 CENPBD1P1-201ENST00000464061 469 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC018635.1-201ENST00000468292 1030 ntBASIC3.48□□□□□ -1.85
RPA3P35244 RPL7P47-201ENST00000497299 556 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC020593.1-201ENST00000507399 299 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC104619.4-201ENST00000510773 249 ntBASIC3.48□□□□□ -1.85
RPA3P35244 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 RN7SKP289-201ENST00000517244 295 ntBASIC3.48□□□□□ -1.85
RPA3P35244 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 IGHV3-32-201ENST00000519182 355 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC022790.1-201ENST00000522872 204 ntBASIC3.48□□□□□ -1.85
RPA3P35244 GTF2IP22-201ENST00000554443 182 ntBASIC3.48□□□□□ -1.85
RPA3P35244 NF1P5-201ENST00000588287 448 ntBASIC3.48□□□□□ -1.85
RPA3P35244 AC010680.4-201ENST00000605334 543 ntBASIC3.48□□□□□ -1.85
RPA3P35244 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.48□□□□□ -1.85
RPA3P35244 AL136964.1-201ENST00000622038 2990 ntBASIC3.48□□□□□ -1.85
RPA3P35244 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RPA3P35244 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
RPA3P35244 AL353743.4-201ENST00000422653 1547 ntBASIC3.48□□□□□ -1.85
RPA3P35244 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.48□□□□□ -1.85
RPA3P35244 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.47□□□□□ -1.85
RPA3P35244 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 AC007390.2-201ENST00000606229 3803 ntBASIC3.47□□□□□ -1.85
RPA3P35244 MTCO1P14-201ENST00000441695 1559 ntBASIC3.47□□□□□ -1.85
RPA3P35244 AC007823.1-201ENST00000569932 1566 ntBASIC3.47□□□□□ -1.85
RPA3P35244 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.47□□□□□ -1.85
RPA3P35244 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
RPA3P35244 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
RPA3P35244 SNORA62.2-201ENST00000364672 152 ntBASIC3.47□□□□□ -1.85
RPA3P35244 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
RPA3P35244 RNU6-31P-201ENST00000384388 108 ntBASIC3.47□□□□□ -1.85
RPA3P35244 PTMAP2-201ENST00000397627 327 ntBASIC3.47□□□□□ -1.85
RPA3P35244 RNA5SP293-201ENST00000410527 113 ntBASIC3.47□□□□□ -1.85
RPA3P35244 BX890604.2-201ENST00000427883 474 ntBASIC3.47□□□□□ -1.85
RPA3P35244 MTCYBP12-201ENST00000440559 1134 ntBASIC3.47□□□□□ -1.85
RPA3P35244 AC023598.1-201ENST00000472521 361 ntBASIC3.47□□□□□ -1.85
RPA3P35244 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.47□□□□□ -1.85
RPA3P35244 AC021087.2-201ENST00000504656 1203 ntBASIC3.47□□□□□ -1.85
RPA3P35244 ATG10-AS1-201ENST00000504846 648 ntBASIC3.47□□□□□ -1.85
RPA3P35244 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
RPA3P35244 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.47□□□□□ -1.85
RPA3P35244 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
RPA3P35244 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RPA3P35244 AC084033.1-201ENST00000550830 633 ntBASIC3.47□□□□□ -1.85
RPA3P35244 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.47□□□□□ -1.85
RPA3P35244 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.47□□□□□ -1.85
RPA3P35244 AP001180.3-201ENST00000582221 145 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms