Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 VN1R84P-201ENST00000593697 235 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 ZNF92P2-201ENST00000600543 1059 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AC112230.1-201ENST00000604342 547 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AC018618.2-201ENST00000604770 446 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AL391497.1-201ENST00000608671 547 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AP001033.2-201ENST00000609701 1003 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.65□□□□□ -1.83
SHMT2P34897 AL162574.2-201ENST00000614618 657 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 U6.48-201ENST00000618523 106 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AL161637.1-201ENST00000622380 412 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 AC091905.1-201ENST00000624400 311 ntBASIC3.65□□□□□ -1.83
SHMT2P34897 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SHMT2P34897 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.65□□□□□ -1.83
SHMT2P34897 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.65□□□□□ -1.83
SHMT2P34897 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SHMT2P34897 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SHMT2P34897 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.64□□□□□ -1.83
SHMT2P34897 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SHMT2P34897 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHMT2P34897 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHMT2P34897 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SHMT2P34897 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 VTA1P1-201ENST00000414044 866 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC017083.1-201ENST00000428093 483 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AL445584.1-201ENST00000431451 330 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 SNORA71B-202ENST00000439232 272 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 RPS27P5-201ENST00000444247 244 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.64□□□□□ -1.83
SHMT2P34897 TPMTP4-201ENST00000450749 678 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 MTCO3P20-201ENST00000454926 688 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 TRBV12-2-201ENST00000489763 344 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC010468.3-201ENST00000508225 458 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 HMGN1P11-201ENST00000508668 303 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC010285.3-201ENST00000511668 676 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 RNU6-1102P-201ENST00000516149 96 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 RN7SKP83-201ENST00000516512 178 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC023632.4-201ENST00000517783 191 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC092747.2-201ENST00000545069 983 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC025260.1-201ENST00000548858 430 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.64□□□□□ -1.83
SHMT2P34897 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.64□□□□□ -1.83
SHMT2P34897 ABI1P1-201ENST00000603375 1120 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 CR392039.4-201ENST00000624968 501 ntBASIC3.64□□□□□ -1.83
SHMT2P34897 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SHMT2P34897 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SHMT2P34897 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHMT2P34897 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.63□□□□□ -1.83
SHMT2P34897 AC024341.1-201ENST00000526444 1552 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SHMT2P34897 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 MTND5P11-201ENST00000511037 1812 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 RNU6-796P-201ENST00000391086 107 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 TATDN1P1-201ENST00000414123 891 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AL158825.1-201ENST00000414735 521 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 PTP4A1P5-201ENST00000420305 455 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC023128.2-201ENST00000420880 1223 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.63□□□□□ -1.83
SHMT2P34897 PNRC2P1-201ENST00000423940 420 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 ARL5AP2-201ENST00000444698 533 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC017099.1-201ENST00000448261 1028 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 DNAJC19P1-201ENST00000455312 319 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 RN7SL542P-201ENST00000467147 294 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC010683.1-201ENST00000473673 378 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC111193.1-201ENST00000504097 155 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.63□□□□□ -1.83
SHMT2P34897 AC025768.1-201ENST00000510057 267 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.63□□□□□ -1.83
SHMT2P34897 IGKV2-36-201ENST00000519999 223 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.63□□□□□ -1.83
SHMT2P34897 AC006960.3-201ENST00000561845 705 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC106785.3-201ENST00000564064 847 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.63□□□□□ -1.83
SHMT2P34897 MIR4512-201ENST00000583257 77 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AC079880.2-201ENST00000603790 1213 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AL163642.2-201ENST00000604722 1019 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AL049634.3-201ENST00000604968 457 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.63□□□□□ -1.83
SHMT2P34897 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 C2orf27A-204ENST00000623058 969 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 OR6C71P-202ENST00000641886 1107 ntBASIC3.63□□□□□ -1.83
SHMT2P34897 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHMT2P34897 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms