Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 AC245517.5-201ENST00000611529 162 ntBASIC6.54□□□□□ -1.36
VARSP26640 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.54□□□□□ -1.36
VARSP26640 AC025809.2-201ENST00000625085 1802 ntBASIC6.54□□□□□ -1.36
VARSP26640 AC011460.1-201ENST00000636268 1834 ntBASIC6.54□□□□□ -1.36
VARSP26640 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 AP002370.1-201ENST00000528055 1602 ntBASIC6.54□□□□□ -1.36
VARSP26640 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.53□□□□□ -1.36
VARSP26640 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 Z97989.1-201ENST00000531702 2421 ntBASIC6.53□□□□□ -1.36
VARSP26640 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 RNU6-562P-201ENST00000362731 107 ntBASIC6.53□□□□□ -1.36
VARSP26640 RN7SKP189-201ENST00000365042 330 ntBASIC6.53□□□□□ -1.36
VARSP26640 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VARSP26640 U3.20-201ENST00000390909 217 ntBASIC6.53□□□□□ -1.36
VARSP26640 Y_RNA.594-201ENST00000410373 140 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 RPSAP35-201ENST00000413753 818 ntBASIC6.53□□□□□ -1.36
VARSP26640 OR6E1P-201ENST00000414424 923 ntBASIC6.53□□□□□ -1.36
VARSP26640 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 PIGPP3-201ENST00000425307 415 ntBASIC6.53□□□□□ -1.36
VARSP26640 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 RPL21P91-201ENST00000429231 479 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC236972.1-201ENST00000433225 199 ntBASIC6.53□□□□□ -1.36
VARSP26640 AL031584.1-201ENST00000447169 754 ntBASIC6.53□□□□□ -1.36
VARSP26640 AL162388.1-201ENST00000450912 352 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AC079804.1-201ENST00000461922 436 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC020893.1-201ENST00000502452 580 ntBASIC6.53□□□□□ -1.36
VARSP26640 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AC022493.2-201ENST00000506122 481 ntBASIC6.53□□□□□ -1.36
VARSP26640 HIGD1AP13-201ENST00000509878 289 ntBASIC6.53□□□□□ -1.36
VARSP26640 MTND1P19-201ENST00000511780 315 ntBASIC6.53□□□□□ -1.36
VARSP26640 FTH1P21-201ENST00000512179 511 ntBASIC6.53□□□□□ -1.36
VARSP26640 EIF3KP3-201ENST00000514461 639 ntBASIC6.53□□□□□ -1.36
VARSP26640 RNU6-138P-201ENST00000515952 107 ntBASIC6.53□□□□□ -1.36
VARSP26640 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.53□□□□□ -1.36
VARSP26640 IGKV2D-38-201ENST00000518423 240 ntBASIC6.53□□□□□ -1.36
VARSP26640 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 OR11H5P-201ENST00000554039 926 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 MIR378C-201ENST00000578683 81 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.53□□□□□ -1.36
VARSP26640 AL590032.1-201ENST00000604920 252 ntBASIC6.53□□□□□ -1.36
VARSP26640 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 MRPL57P3-201ENST00000619218 176 ntBASIC6.53□□□□□ -1.36
VARSP26640 SNX18P10-201ENST00000625014 519 ntBASIC6.53□□□□□ -1.36
VARSP26640 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.53□□□□□ -1.36
VARSP26640 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VARSP26640 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
VARSP26640 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VARSP26640 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.53□□□□□ -1.36
VARSP26640 MTCO1P24-201ENST00000515438 1558 ntBASIC6.52□□□□□ -1.36
VARSP26640 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
VARSP26640 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
VARSP26640 OR55B1P-203ENST00000641518 2602 ntBASIC6.52□□□□□ -1.37
VARSP26640 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
VARSP26640 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.52□□□□□ -1.37
VARSP26640 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARSP26640 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms