Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.495-201ENST00000384435 112 ntBASIC7.93□□□□□ -1.14
CD44P16070 SNORD78.2-201ENST00000391076 69 ntBASIC7.93□□□□□ -1.14
CD44P16070 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 RPS26P40-201ENST00000435209 294 ntBASIC7.93□□□□□ -1.14
CD44P16070 FABP5P13-201ENST00000452144 328 ntBASIC7.93□□□□□ -1.14
CD44P16070 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 RN7SL213P-201ENST00000463482 317 ntBASIC7.93□□□□□ -1.14
CD44P16070 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 RN7SL688P-201ENST00000471754 275 ntBASIC7.93□□□□□ -1.14
CD44P16070 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.93□□□□□ -1.14
CD44P16070 RPL30P11-201ENST00000495304 339 ntBASIC7.93□□□□□ -1.14
CD44P16070 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.93□□□□□ -1.14
CD44P16070 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 RPL23AP92-201ENST00000603609 255 ntBASIC7.93□□□□□ -1.14
CD44P16070 AC011476.5-201ENST00000615594 130 ntBASIC7.93□□□□□ -1.14
CD44P16070 AC025521.1-201ENST00000621624 286 ntBASIC7.93□□□□□ -1.14
CD44P16070 AP001784.1-201ENST00000624107 428 ntBASIC7.93□□□□□ -1.14
CD44P16070 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
CD44P16070 CASC19-204ENST00000641001 2055 ntBASIC7.93□□□□□ -1.14
CD44P16070 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.93□□□□□ -1.14
CD44P16070 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
CD44P16070 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.92□□□□□ -1.14
CD44P16070 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.92□□□□□ -1.14
CD44P16070 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 AC069528.2-201ENST00000624849 1991 ntBASIC7.92□□□□□ -1.14
CD44P16070 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 RNU6-653P-201ENST00000363074 106 ntBASIC7.92□□□□□ -1.14
CD44P16070 SNORA51.7-201ENST00000384171 134 ntBASIC7.92□□□□□ -1.14
CD44P16070 MIR649-201ENST00000384843 97 ntBASIC7.92□□□□□ -1.14
CD44P16070 RPL23AP26-201ENST00000412728 464 ntBASIC7.92□□□□□ -1.14
CD44P16070 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.92□□□□□ -1.14
CD44P16070 AC063976.4-201ENST00000421971 163 ntBASIC7.92□□□□□ -1.14
CD44P16070 AC024067.1-201ENST00000426199 223 ntBASIC7.92□□□□□ -1.14
CD44P16070 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.92□□□□□ -1.14
CD44P16070 HMGB3P24-201ENST00000433260 622 ntBASIC7.92□□□□□ -1.14
CD44P16070 AC108039.2-201ENST00000440214 359 ntBASIC7.92□□□□□ -1.14
CD44P16070 RPS10P18-201ENST00000442662 495 ntBASIC7.92□□□□□ -1.14
CD44P16070 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 AC074290.1-201ENST00000448883 135 ntBASIC7.92□□□□□ -1.14
CD44P16070 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 AC022034.3-201ENST00000471393 478 ntBASIC7.92□□□□□ -1.14
CD44P16070 RPL31P60-201ENST00000478450 367 ntBASIC7.92□□□□□ -1.14
CD44P16070 RNU6-1334P-201ENST00000516032 105 ntBASIC7.92□□□□□ -1.14
CD44P16070 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.92□□□□□ -1.14
CD44P16070 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.92□□□□□ -1.14
CD44P16070 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.92□□□□□ -1.14
CD44P16070 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 MIR4262-201ENST00000578394 54 ntBASIC7.92□□□□□ -1.14
CD44P16070 RN7SL667P-201ENST00000582817 298 ntBASIC7.92□□□□□ -1.14
CD44P16070 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.92□□□□□ -1.14
CD44P16070 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
CD44P16070 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CD44P16070 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC7.92□□□□□ -1.14
CD44P16070 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.92□□□□□ -1.14
CD44P16070 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.91□□□□□ -1.14
CD44P16070 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.91□□□□□ -1.14
CD44P16070 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CD44P16070 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
CD44P16070 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.91□□□□□ -1.14
CD44P16070 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.91□□□□□ -1.14
CD44P16070 RNU6-512P-201ENST00000364438 103 ntBASIC7.91□□□□□ -1.14
CD44P16070 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CD44P16070 RN7SKP221-201ENST00000410420 301 ntBASIC7.91□□□□□ -1.14
CD44P16070 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 PRDX1P1-201ENST00000449329 596 ntBASIC7.91□□□□□ -1.14
CD44P16070 AL353691.1-201ENST00000451332 387 ntBASIC7.91□□□□□ -1.14
CD44P16070 RPL34P22-201ENST00000468193 318 ntBASIC7.91□□□□□ -1.14
CD44P16070 RN7SL259P-201ENST00000478499 253 ntBASIC7.91□□□□□ -1.14
CD44P16070 RPL23AP8-201ENST00000479812 475 ntBASIC7.91□□□□□ -1.14
CD44P16070 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.91□□□□□ -1.14
CD44P16070 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.91□□□□□ -1.14
CD44P16070 AC016065.2-201ENST00000514530 444 ntBASIC7.91□□□□□ -1.14
CD44P16070 MIR2355-201ENST00000517199 87 ntBASIC7.91□□□□□ -1.14
CD44P16070 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms