Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL6A2P12110 RNU6-952P-201ENST00000391164 108 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 TPMTP2-201ENST00000414372 726 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 BMS1P17-202ENST00000416720 316 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 PIGFP2-201ENST00000421400 651 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.29□□□□□ -1.56
COL6A2P12110 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.29□□□□□ -1.56
COL6A2P12110 USP12PX-201ENST00000432383 1057 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 CYCSP24-201ENST00000445119 316 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 GAPDHP25-201ENST00000447061 1001 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.29□□□□□ -1.56
COL6A2P12110 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 MTCO1P42-201ENST00000457379 726 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC026410.2-201ENST00000460281 156 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 RN7SL515P-201ENST00000463999 297 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 RPL31P50-201ENST00000471002 296 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC023598.1-201ENST00000472521 361 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AP000893.1-201ENST00000474462 794 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 FAM172BP-201ENST00000487497 1089 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 RN7SL814P-201ENST00000487715 300 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 TMEM251P1-201ENST00000503717 318 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 ARL4AP2-201ENST00000507378 601 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC024589.1-201ENST00000512207 263 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 CYCSP28-201ENST00000534284 321 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AL157687.1-201ENST00000554853 619 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.29□□□□□ -1.56
COL6A2P12110 HMGB1P33-201ENST00000563485 527 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.29□□□□□ -1.56
COL6A2P12110 AC022884.2-201ENST00000578535 580 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 AC022140.2-201ENST00000623500 188 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 AC068880.5-201ENST00000624331 290 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL6A2P12110 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
COL6A2P12110 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL6A2P12110 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.29□□□□□ -1.56
COL6A2P12110 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
COL6A2P12110 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.28□□□□□ -1.56
COL6A2P12110 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
COL6A2P12110 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 RPL23AP57-201ENST00000332361 466 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RNA5SP46-201ENST00000362370 120 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 U8.3-201ENST00000363321 132 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RNU6-441P-201ENST00000384545 106 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 Y_RNA.573-201ENST00000384763 105 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 MIR649-201ENST00000384843 97 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 HMGN1P20-201ENST00000411849 300 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL6A2P12110 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 AL139413.1-201ENST00000421309 217 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 NANOGP6-201ENST00000429190 847 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RPS29P14-201ENST00000431518 171 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 MTND3P23-201ENST00000431980 347 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RSU1P2-202ENST00000437884 485 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 MTND4LP16-201ENST00000440828 295 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RPL23AP16-201ENST00000441715 421 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AC019185.1-201ENST00000442718 389 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 RPL5P22-201ENST00000480199 884 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 snoU109.6-201ENST00000516831 118 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 SNORA20.3-201ENST00000516880 132 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AP003122.4-201ENST00000530980 758 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 AL049872.1-201ENST00000556323 322 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.28□□□□□ -1.56
COL6A2P12110 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.28□□□□□ -1.56
COL6A2P12110 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.28□□□□□ -1.56
COL6A2P12110 AL162431.4-201ENST00000604674 411 ntBASIC5.28□□□□□ -1.56
COL6A2P12110 AC008277.2-201ENST00000605196 797 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms