Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC008751.2-201ENST00000597885 980 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC107294.1-201ENST00000609524 467 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 Z99129.2-201ENST00000619967 314 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.21□□□□□ -1.74
COL2A1P02458 AP003399.1-201ENST00000637534 361 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 AC068137.4-201ENST00000638485 296 ntBASIC4.21□□□□□ -1.74
COL2A1P02458 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL2A1P02458 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL2A1P02458 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL2A1P02458 RNU6-650P-201ENST00000365658 111 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL2A1P02458 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
COL2A1P02458 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL2A1P02458 RNU6-1000P-201ENST00000391066 106 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 MTCO2P8-201ENST00000412213 658 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.2□□□□□ -1.74
COL2A1P02458 TRGV5P-201ENST00000419915 354 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC005300.1-201ENST00000428401 373 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.2□□□□□ -1.74
COL2A1P02458 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL2A1P02458 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.2□□□□□ -1.74
COL2A1P02458 AL009048.1-201ENST00000450437 298 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 RPS26P15-201ENST00000488067 348 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC010627.1-201ENST00000503819 1294 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC069306.1-201ENST00000507006 843 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC027338.1-201ENST00000514840 825 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 RNU2-27P-201ENST00000516185 142 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.2□□□□□ -1.74
COL2A1P02458 EEF1A1P37-201ENST00000522748 715 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC113192.3-201ENST00000529152 742 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.2□□□□□ -1.74
COL2A1P02458 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.2□□□□□ -1.74
COL2A1P02458 BNIP3P24-201ENST00000593398 557 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 AC008121.2-201ENST00000614647 523 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.2□□□□□ -1.74
COL2A1P02458 AC013437.2-201ENST00000639587 677 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
COL2A1P02458 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.2□□□□□ -1.74
COL2A1P02458 MFSD8-236ENST00000641509 4050 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL2A1P02458 SAGE2P-201ENST00000420011 2126 ntBASIC4.2□□□□□ -1.74
COL2A1P02458 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL2A1P02458 RPL21P109-201ENST00000422213 475 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 MOB1AP1-201ENST00000430903 535 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AL035458.1-201ENST00000433096 585 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 DUXAP8-207ENST00000456786 622 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 RN7SKP265-201ENST00000516448 223 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 RN7SKP287-201ENST00000516546 266 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 MYL12AP1-201ENST00000518490 515 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC008489.1-201ENST00000524271 483 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AP000926.4-201ENST00000527351 454 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COL2A1P02458 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC135279.1-201ENST00000543493 504 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.19□□□□□ -1.74
COL2A1P02458 HMGN2P47-201ENST00000559378 272 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 AL133457.1-201ENST00000564251 987 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC079148.1-201ENST00000565944 819 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.19□□□□□ -1.74
COL2A1P02458 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.19□□□□□ -1.74
COL2A1P02458 MIR5186-201ENST00000577504 120 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC006116.7-201ENST00000590141 756 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 KLKP1-201ENST00000595979 403 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 Z94722.1-201ENST00000604328 474 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC093424.1-201ENST00000604999 338 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC064807.4-201ENST00000607201 407 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 DUXAP10-204ENST00000612052 616 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC233309.1-201ENST00000619522 751 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC126544.2-201ENST00000625174 749 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 AC119674.1-212ENST00000641155 993 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 AC233263.6-201ENST00000631132 1963 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL2A1P02458 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 AC139426.3-201ENST00000605648 2059 ntBASIC4.19□□□□□ -1.74
COL2A1P02458 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL2A1P02458 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms