Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.06□□□□□ -1.6
CNOT4O95628 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.06□□□□□ -1.6
CNOT4O95628 FARSBP1-201ENST00000435808 1778 ntBASIC5.06□□□□□ -1.6
CNOT4O95628 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CNOT4O95628 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNOT4O95628 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CNOT4O95628 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNOT4O95628 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.06□□□□□ -1.6
CNOT4O95628 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CNOT4O95628 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CNOT4O95628 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 RN7SKP162-201ENST00000363605 345 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 U3.7-201ENST00000363668 216 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 Y_RNA.356-201ENST00000365475 113 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 RNU6-533P-201ENST00000384144 107 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL450338.1-201ENST00000407987 512 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 RNU4-34P-201ENST00000410431 124 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL354868.1-201ENST00000417077 482 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 BX295541.1-201ENST00000417774 250 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC092634.6-201ENST00000418558 192 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AL513185.2-201ENST00000425543 193 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC008850.1-201ENST00000427546 362 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 MTND6P13-201ENST00000443510 523 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL450996.1-201ENST00000445574 1202 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC007677.1-201ENST00000445757 515 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC073909.1-201ENST00000447112 999 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 MTCO3P20-201ENST00000454926 688 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC004129.2-201ENST00000457229 287 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC087312.1-201ENST00000471411 480 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC023598.1-201ENST00000472521 361 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 RPL32P9-201ENST00000487963 407 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC108693.1-201ENST00000496068 432 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 MTND5P5-201ENST00000503764 376 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC010493.1-201ENST00000513479 292 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 BX510359.5-201ENST00000515651 304 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 RNU6-202P-201ENST00000515998 96 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC139365.2-201ENST00000517972 253 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 ARL2BPP5-201ENST00000523141 481 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC013828.2-201ENST00000532487 235 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL512310.1-201ENST00000548639 172 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AL442663.2-201ENST00000554385 511 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC093519.1-201ENST00000566109 298 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC008687.2-201ENST00000597865 520 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 BNIP3P11-201ENST00000603878 563 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AL136295.6-201ENST00000610486 658 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 AP000843.1-201ENST00000624880 701 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 AC006065.6-201ENST00000625201 545 ntBASIC5.05□□□□□ -1.6
CNOT4O95628 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CNOT4O95628 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CNOT4O95628 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
CNOT4O95628 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.05□□□□□ -1.6
CNOT4O95628 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.04□□□□□ -1.6
CNOT4O95628 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CNOT4O95628 AP004607.3-201ENST00000530354 3915 ntBASIC5.04□□□□□ -1.6
CNOT4O95628 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNOT4O95628 OR4A15-201ENST00000314706 1035 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms