Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 XIAPP3-201ENST00000312918 795 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLDN9O95484 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 SNORA70E-201ENST00000384492 135 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLDN9O95484 PRRC2CP1-201ENST00000404428 159 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 RNU2-21P-201ENST00000410368 188 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 HMGB3P31-201ENST00000413333 595 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 TCEA1P2-201ENST00000420496 906 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 SETD6P1-201ENST00000444575 317 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 NANOGP10-201ENST00000453325 895 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 MRPL35P4-201ENST00000453682 566 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC022034.3-201ENST00000471393 478 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC010460.1-201ENST00000507087 466 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 SETP12-201ENST00000514068 805 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 Vault.1-201ENST00000516474 102 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 MIR2114-201ENST00000516645 80 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 MIR2116-201ENST00000517221 80 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 AC083923.1-201ENST00000523708 376 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN9O95484 CYCSP30-201ENST00000546447 172 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN9O95484 AGGF1P6-201ENST00000569213 976 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 AC099489.2-201ENST00000574976 260 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC012254.4-201ENST00000588843 273 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 VN1R85P-201ENST00000601587 426 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN9O95484 OR2BH1P-201ENST00000608850 864 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 RNA5SP196-201ENST00000625967 102 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN9O95484 AL590396.2-201ENST00000636511 1041 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN9O95484 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CLDN9O95484 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLDN9O95484 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN9O95484 CEP170P1-201ENST00000502249 4587 ntBASIC3.63□□□□□ -1.83
CLDN9O95484 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 CR381670.1-201ENST00000624291 1693 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 ENSAP3-201ENST00000312710 333 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 SNORA57.1-201ENST00000391227 145 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AL138878.1-201ENST00000405131 347 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 ATF1P1-201ENST00000406040 927 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC092745.2-202ENST00000411880 369 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN9O95484 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 OR4F13P-201ENST00000428478 931 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 CDC27P1-201ENST00000445384 715 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 PPIAP3-201ENST00000450588 505 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN9O95484 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 snoU13.7-201ENST00000459220 104 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC089999.1-201ENST00000460336 374 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC126121.1-201ENST00000482313 553 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC068305.1-201ENST00000497406 726 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 AC133963.2-201ENST00000513686 578 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 RN7SKP277-201ENST00000516895 283 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 RN7SKP96-201ENST00000516948 297 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN9O95484 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN9O95484 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN9O95484 AL121766.1-201ENST00000547436 487 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN9O95484 AC027104.1-201ENST00000563702 681 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC106785.1-201ENST00000565935 262 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC009101.1-201ENST00000568135 242 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN9O95484 AC079880.2-201ENST00000603790 1213 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 AC024941.1-201ENST00000612250 334 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 XPOTP1-201ENST00000443317 2398 ntBASIC3.62□□□□□ -1.83
CLDN9O95484 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN9O95484 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN9O95484 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms