Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC080013.3-201ENST00000606839 578 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AP005137.2-201ENST00000609238 400 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 AL353726.1-201ENST00000614041 1000 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC006971.1-201ENST00000407916 4486 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAPGEF3O95398 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RAPGEF3O95398 AC046144.1-201ENST00000478559 1853 ntBASIC6.28□□□□□ -1.4
RAPGEF3O95398 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RAPGEF3O95398 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RAPGEF3O95398 MTND4P31-201ENST00000425607 1343 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 Y_RNA.192-201ENST00000363977 102 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 RNA5SP72-201ENST00000364442 117 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 RNU6-225P-201ENST00000384613 103 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AL590290.1-201ENST00000405336 380 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 SNORA74C-2-201ENST00000411179 201 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 RNU6-575P-201ENST00000411326 105 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 LUZP4P1-201ENST00000415420 344 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 PTP4A1P5-201ENST00000420305 455 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 USP9YP26-201ENST00000421008 661 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 EIF1P3-201ENST00000423841 334 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 RPL7P4-203ENST00000430239 730 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 VN1R108P-201ENST00000431580 830 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 YWHAZP7-201ENST00000436906 631 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC092393.1-201ENST00000439625 742 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 MTND5P2-201ENST00000442927 1142 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 RPL38P1-201ENST00000460914 211 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 DUXAP1-201ENST00000556632 463 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 NBR2-204ENST00000587322 63 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 Z98200.1-201ENST00000607298 470 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC011939.3-201ENST00000613686 466 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC090246.1-201ENST00000616499 426 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC068620.4-201ENST00000636730 1182 ntBASIC6.27□□□□□ -1.41
RAPGEF3O95398 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RAPGEF3O95398 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.27□□□□□ -1.41
RAPGEF3O95398 AC021755.1-201ENST00000559747 1447 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 RNU6-249P-201ENST00000363016 102 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 OR1L1-202ENST00000373686 1083 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 RSL24D1P4-201ENST00000400938 484 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 BOLA3P4-201ENST00000418151 400 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 AC104333.2-201ENST00000422630 192 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 USP9YP31-201ENST00000431405 881 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 RPS24P8-201ENST00000431490 402 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 USP9YP22-201ENST00000438971 294 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 RPS26P28-201ENST00000470806 348 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 RPS29P19-201ENST00000479709 171 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 RPS3AP43-201ENST00000479743 781 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 RNA5SP446-201ENST00000515955 82 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 RNU6-416P-201ENST00000516265 103 ntBASIC6.26□□□□□ -1.41
RAPGEF3O95398 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.26□□□□□ -1.41
RAPGEF3O95398 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms