Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHOX2O60902 AC008264.2-201ENST00000610193 3731 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 RNA5SP130-201ENST00000364431 114 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHOX2O60902 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHOX2O60902 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC108032.1-201ENST00000416706 207 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 ARL4AP4-201ENST00000434170 518 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC105402.2-201ENST00000438503 358 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 MTCYBP12-201ENST00000440559 1134 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHOX2O60902 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.59□□□□□ -1.83
SHOX2O60902 AC146507.2-201ENST00000460608 476 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC093278.1-201ENST00000494700 600 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.59□□□□□ -1.83
SHOX2O60902 RNA5SP164-201ENST00000516533 110 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 RNA5SP309-201ENST00000516670 106 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHOX2O60902 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.59□□□□□ -1.83
SHOX2O60902 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.59□□□□□ -1.83
SHOX2O60902 AC138473.1-201ENST00000605717 526 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC012531.5-201ENST00000611375 151 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 AC243654.2-201ENST00000612843 443 ntBASIC3.59□□□□□ -1.83
SHOX2O60902 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHOX2O60902 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.59□□□□□ -1.83
SHOX2O60902 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.59□□□□□ -1.83
SHOX2O60902 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.59□□□□□ -1.84
SHOX2O60902 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.59□□□□□ -1.84
SHOX2O60902 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SHOX2O60902 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 SNORA70C-201ENST00000384538 135 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.58□□□□□ -1.84
SHOX2O60902 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 AJ239321.1-201ENST00000424255 564 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 COX6CP15-201ENST00000426313 211 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 AL691449.1-201ENST00000426570 421 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 AL050321.1-201ENST00000432363 400 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 MTCYBP31-201ENST00000438855 1122 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 AL157827.1-201ENST00000447622 132 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 NUTF2P3-201ENST00000448540 384 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOX2O60902 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.58□□□□□ -1.84
SHOX2O60902 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.58□□□□□ -1.84
SHOX2O60902 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 AC112200.1-201ENST00000625015 234 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 AP000553.6-201ENST00000641242 118 ntBASIC3.58□□□□□ -1.84
SHOX2O60902 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
SHOX2O60902 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHOX2O60902 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOX2O60902 RPL7P26-201ENST00000333817 754 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 RN7SKP280-201ENST00000364196 304 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 U3.15-201ENST00000365398 212 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SHOX2O60902 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 OR2AS1P-201ENST00000427827 319 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHOX2O60902 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 RPL7P15-201ENST00000461190 712 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 RN7SL594P-201ENST00000470590 287 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC006511.1-201ENST00000470614 315 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOX2O60902 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC023050.1-201ENST00000498198 304 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 OR5H3P-201ENST00000502817 919 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 CDH12P2-201ENST00000504393 298 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC021146.7-201ENST00000509604 775 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.57□□□□□ -1.84
SHOX2O60902 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 HMGB1P51-201ENST00000605166 638 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC010680.4-201ENST00000605334 543 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms