Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 Z93242.1-201ENST00000427102 353 ntBASIC3.94□□□□□ -1.78
SNX3O60493 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.94□□□□□ -1.78
SNX3O60493 USP9YP24-201ENST00000434374 697 ntBASIC3.94□□□□□ -1.78
SNX3O60493 Z80107.1-201ENST00000436830 412 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AL357520.1-201ENST00000441557 453 ntBASIC3.94□□□□□ -1.78
SNX3O60493 USP9YP17-201ENST00000444617 696 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC079776.3-201ENST00000450665 370 ntBASIC3.94□□□□□ -1.78
SNX3O60493 CEACAMP6-201ENST00000452007 574 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
SNX3O60493 RPL12P20-201ENST00000475538 479 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC004815.1-201ENST00000484185 331 ntBASIC3.94□□□□□ -1.78
SNX3O60493 RPL29P14-201ENST00000495837 428 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX3O60493 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX3O60493 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX3O60493 RN7SKP83-201ENST00000516512 178 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC034205.1-201ENST00000520621 638 ntBASIC3.94□□□□□ -1.78
SNX3O60493 OR8G5-201ENST00000524943 1041 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX3O60493 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 AC074029.1-201ENST00000552531 1044 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX3O60493 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 UBE2FP2-201ENST00000566646 462 ntBASIC3.94□□□□□ -1.78
SNX3O60493 HNRNPCP4-201ENST00000571636 900 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC022655.2-201ENST00000577280 318 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX3O60493 AC069061.3-201ENST00000582254 823 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC022069.1-201ENST00000582910 658 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC015688.2-201ENST00000584523 262 ntBASIC3.94□□□□□ -1.78
SNX3O60493 VN1R83P-201ENST00000595685 445 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC244505.7-201ENST00000599675 272 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.94□□□□□ -1.78
SNX3O60493 AL354760.1-201ENST00000608357 643 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 MIR6886-201ENST00000619864 61 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AP005019.3-201ENST00000620418 560 ntBASIC3.94□□□□□ -1.78
SNX3O60493 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AP006248.2-201ENST00000623309 592 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SNX3O60493 AC008725.1-201ENST00000605123 2263 ntBASIC3.94□□□□□ -1.78
SNX3O60493 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SNX3O60493 Z82217.1-201ENST00000625157 8149 ntBASIC3.94□□□□□ -1.78
SNX3O60493 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX3O60493 PRO1804-201ENST00000623780 2050 ntBASIC3.93□□□□□ -1.78
SNX3O60493 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 SNORA51.1-201ENST00000363243 140 ntBASIC3.93□□□□□ -1.78
SNX3O60493 snoZ40.1-201ENST00000364540 72 ntBASIC3.93□□□□□ -1.78
SNX3O60493 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNX3O60493 SNORA70F-201ENST00000384142 135 ntBASIC3.93□□□□□ -1.78
SNX3O60493 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNX3O60493 SNORA40.2-201ENST00000390847 128 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AL391417.1-201ENST00000404100 426 ntBASIC3.93□□□□□ -1.78
SNX3O60493 MTCO3P31-201ENST00000405526 789 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AL450992.3-201ENST00000413192 568 ntBASIC3.93□□□□□ -1.78
SNX3O60493 Z75741.2-201ENST00000417272 1167 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC233981.1-201ENST00000423224 461 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 OR4F13P-201ENST00000428478 931 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX3O60493 RPL23AP46-201ENST00000438548 490 ntBASIC3.93□□□□□ -1.78
SNX3O60493 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 RPS29P31-201ENST00000446147 164 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AL589880.1-201ENST00000448271 287 ntBASIC3.93□□□□□ -1.78
SNX3O60493 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 ZNF886P-201ENST00000450781 723 ntBASIC3.93□□□□□ -1.78
SNX3O60493 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 AC092155.2-201ENST00000454675 477 ntBASIC3.93□□□□□ -1.78
SNX3O60493 PTGES3P5-201ENST00000455109 434 ntBASIC3.93□□□□□ -1.78
SNX3O60493 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 RPL37P6-202ENST00000464216 403 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AP000893.1-201ENST00000474462 794 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX3O60493 AF213884.1-201ENST00000488102 463 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC025674.1-201ENST00000507074 324 ntBASIC3.93□□□□□ -1.78
SNX3O60493 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNX3O60493 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX3O60493 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.93□□□□□ -1.78
SNX3O60493 RNA5SP519-201ENST00000516480 119 ntBASIC3.93□□□□□ -1.78
SNX3O60493 IGKV2D-23-201ENST00000518179 286 ntBASIC3.93□□□□□ -1.78
SNX3O60493 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms