Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GRIN3BO60391 AL022238.1-201ENST00000442557 355 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AL162591.2-201ENST00000449634 317 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 IGHV5-78-201ENST00000450948 295 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.19□□□□□ -1.42
GRIN3BO60391 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.19□□□□□ -1.42
GRIN3BO60391 CYCSP34-201ENST00000458172 304 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 AP002748.2-201ENST00000528671 348 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.19□□□□□ -1.42
GRIN3BO60391 VN1R79P-201ENST00000593540 513 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC008814.1-201ENST00000603797 406 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC090578.1-201ENST00000604955 591 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC091965.4-201ENST00000607691 587 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC131902.3-201ENST00000611767 581 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC108479.2-201ENST00000617314 601 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 MIR6075-201ENST00000620782 95 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 AC138649.3-201ENST00000622154 254 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 AC083843.2-201ENST00000568248 6253 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GRIN3BO60391 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
GRIN3BO60391 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
GRIN3BO60391 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GRIN3BO60391 AC138907.8-201ENST00000623981 2256 ntBASIC6.19□□□□□ -1.42
GRIN3BO60391 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.19□□□□□ -1.42
GRIN3BO60391 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
GRIN3BO60391 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
GRIN3BO60391 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GRIN3BO60391 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.18□□□□□ -1.42
GRIN3BO60391 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.18□□□□□ -1.42
GRIN3BO60391 AC109780.2-201ENST00000413467 845 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 HMGB3P23-201ENST00000414981 585 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 USP9YP13-201ENST00000417797 480 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.18□□□□□ -1.42
GRIN3BO60391 AC022022.1-201ENST00000430304 178 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.18□□□□□ -1.42
GRIN3BO60391 RPL23AP83-201ENST00000434984 473 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC092427.1-201ENST00000439177 601 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 CBX1P4-201ENST00000439415 457 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.18□□□□□ -1.42
GRIN3BO60391 MED28P3-201ENST00000444288 531 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC114755.5-201ENST00000447760 831 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC091564.1-201ENST00000464563 479 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC108941.1-201ENST00000502853 530 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 GLUD1P3-202ENST00000508551 200 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 ANP32BP3-201ENST00000559213 706 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.18□□□□□ -1.42
GRIN3BO60391 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.18□□□□□ -1.42
GRIN3BO60391 AC024220.1-201ENST00000603675 484 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 uc_338.9-201ENST00000617424 182 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC007742.2-201ENST00000618226 398 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AL157786.1-207ENST00000627771 695 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.18□□□□□ -1.42
GRIN3BO60391 CRYM-AS1-204ENST00000637983 556 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
GRIN3BO60391 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GRIN3BO60391 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
GRIN3BO60391 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
GRIN3BO60391 DCAF13P1-201ENST00000495256 1330 ntBASIC6.18□□□□□ -1.42
GRIN3BO60391 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.18□□□□□ -1.42
GRIN3BO60391 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GRIN3BO60391 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.18□□□□□ -1.42
GRIN3BO60391 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GRIN3BO60391 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.17□□□□□ -1.42
GRIN3BO60391 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.17□□□□□ -1.42
GRIN3BO60391 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GRIN3BO60391 SMG1P7-201ENST00000565246 2704 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GRIN3BO60391 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GRIN3BO60391 RN7SKP280-201ENST00000364196 304 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 Y_RNA.256-201ENST00000364594 104 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 SNORD115-47-201ENST00000391226 86 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 MIR1277-201ENST00000408536 78 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 Y_RNA.598-201ENST00000410480 95 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 USP9YP6-201ENST00000413550 854 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GRIN3BO60391 PSPHP1-201ENST00000450062 261 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 USP9YP34-201ENST00000453983 808 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 snoU109.1-201ENST00000459339 135 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 SNORD125-201ENST00000459538 96 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.17□□□□□ -1.42
GRIN3BO60391 AC021678.1-201ENST00000505195 936 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.17□□□□□ -1.42
GRIN3BO60391 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.17□□□□□ -1.42
GRIN3BO60391 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.17□□□□□ -1.42
GRIN3BO60391 EIF5A2P1-201ENST00000564027 460 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 AC009101.1-201ENST00000568135 242 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 MIR3138-201ENST00000585238 82 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 AC025857.2-201ENST00000602711 238 ntBASIC6.17□□□□□ -1.42
GRIN3BO60391 AC115286.1-201ENST00000604298 434 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms