Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL357078.2-201ENST00000416486 427 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPL7P53-201ENST00000421245 739 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR5AW1P-201ENST00000426334 1006 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CYCSP4-201ENST00000429682 331 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL159987.2-201ENST00000432754 307 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CYCSP43-201ENST00000438233 310 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 XKRY2-201ENST00000442362 1093 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPS17P13-201ENST00000448974 407 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPL7P31-201ENST00000450192 724 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL354710.1-201ENST00000453641 246 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPL7P48-201ENST00000461513 746 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RPL7P47-201ENST00000497299 556 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 FTH1P9-201ENST00000513251 355 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 SNORA74D-201ENST00000516404 141 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RANP9-201ENST00000519957 271 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 MIR4738-201ENST00000579134 87 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC010680.3-201ENST00000604215 520 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC084036.1-201ENST00000609190 508 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL592295.2-201ENST00000612578 206 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL162574.2-201ENST00000614618 657 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC091953.5-201ENST00000622919 233 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 EXOC5P1-201ENST00000510543 1969 ntBASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TMX2-CTNND1H3BSU7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 SNORA27.3-201ENST00000364937 134 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL158156.1-201ENST00000422509 473 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 MTND4LP13-201ENST00000425022 298 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC091390.3-201ENST00000426478 338 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC073063.1-201ENST00000434352 607 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 ARL5AP3-201ENST00000439327 386 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 UBDP1-202ENST00000457888 382 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP000926.1-201ENST00000479573 241 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 MIMT1-201ENST00000597105 1050 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC040174.2-201ENST00000602701 465 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL163642.2-201ENST00000604722 1019 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 SNORA62.6-201ENST00000606322 83 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNVU1-4-201ENST00000612985 164 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL713922.2-201ENST00000619384 716 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL162233.1-201ENST00000620014 944 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 ATE1-AS1-202ENST00000636460 506 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC009452.1-201ENST00000640823 606 ntBASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMX2-CTNND1H3BSU7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AC032011.1-201ENST00000611703 1549 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 AL079305.1-201ENST00000623159 3008 ntBASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TMX2-CTNND1H3BSU7 RNU6-1251P-201ENST00000364502 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms