Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTPDC1A2A3K4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PTPDC1A2A3K4 AC079741.1-201ENST00000321498 212 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MIR506-201ENST00000384998 124 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MIR298-201ENST00000401212 88 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MIR1271-201ENST00000408537 86 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 GSTM3P2-201ENST00000412746 530 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC007899.1-201ENST00000412776 775 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AL512286.1-201ENST00000439244 400 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 USP9YP29-201ENST00000445112 563 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 TDGF1P1-201ENST00000445734 527 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 NPM1P39-201ENST00000449818 867 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 SLC31A1P1-201ENST00000451221 567 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 SUMO2P2-201ENST00000456482 255 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 ARPC3P2-201ENST00000457786 533 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 RNA5SP269-201ENST00000459032 137 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 RPS4XP15-201ENST00000489210 795 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 KLRA1P-201ENST00000503499 986 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 FTH1P11-201ENST00000517577 551 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 RN7SL802P-201ENST00000577858 299 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 ELOCP28-201ENST00000590044 317 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AP003465.2-201ENST00000602571 373 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AL596327.1-201ENST00000603629 213 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 FAM27B-201ENST00000610601 213 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC018816.2-201ENST00000621460 353 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC079228.1-201ENST00000624774 1049 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 CR381572.2-201ENST00000624852 397 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AL359922.3-201ENST00000624779 1670 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 CR383658.2-201ENST00000547576 1525 ntBASIC5.58□□□□□ -1.52
PTPDC1A2A3K4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC010928.1-201ENST00000592477 1447 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RNU6-251P-201ENST00000363235 104 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 MIR141-201ENST00000384975 95 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RPS4XP9-201ENST00000405151 780 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC114755.2-201ENST00000413520 361 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 ELOCP17-201ENST00000414751 326 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC069213.2-201ENST00000420238 366 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC009237.2-201ENST00000421358 284 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RPL7P57-201ENST00000423238 740 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RPL34P6-201ENST00000432390 345 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 LARP1BP3-201ENST00000437229 869 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC005154.2-201ENST00000438110 379 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 MRPL48P1-201ENST00000445390 636 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AL513533.1-201ENST00000453728 415 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 SRRM1P2-201ENST00000464531 1192 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RN7SL354P-201ENST00000469282 294 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RN7SL860P-201ENST00000473738 223 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 CDC42P4-201ENST00000510507 563 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RNU6-488P-201ENST00000515918 99 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 RNU6-347P-201ENST00000516658 105 ntBASIC5.57□□□□□ -1.52
PTPDC1A2A3K4 IGKV1-32-201ENST00000519290 311 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms