Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC019278.1-201ENST00000623516 479 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC139792.2-201ENST00000624218 587 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL049536.1-201ENST00000625043 744 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL390862.1-201ENST00000635467 1469 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MAPK10-320ENST00000641462 6696 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-216P-201ENST00000363282 104 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RNA5SP28-201ENST00000363841 119 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 TIMM9P2-201ENST00000419324 266 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MTCO3P1-205ENST00000422088 832 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 IPMKP1-201ENST00000425988 855 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPP40P1-201ENST00000426762 456 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPS25P9-201ENST00000435591 252 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 GSTA7P-201ENST00000438425 448 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC114495.1-201ENST00000441274 436 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 EEF1A1P1-201ENST00000447052 739 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MTND2P19-201ENST00000449129 1012 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 NDUFA5P7-201ENST00000452914 242 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MTCO3P11-201ENST00000455103 774 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 DHFRP3-201ENST00000455595 559 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPL31P3-201ENST00000458430 332 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC053481.1-201ENST00000467217 306 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 RPL32P9-201ENST00000487963 407 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC005178.1-201ENST00000508392 440 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL671862.1-201ENST00000515851 349 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 OR5AK1P-201ENST00000524837 922 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AP000827.1-201ENST00000527814 258 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 OR5BC1P-201ENST00000529327 739 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 MTCYBP33-201ENST00000575007 1130 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL354984.3-201ENST00000604803 325 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC018714.1-201ENST00000605028 208 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC069304.2-201ENST00000605154 435 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC091946.2-201ENST00000606105 291 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC211433.2-201ENST00000608433 387 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AL607023.1-201ENST00000620045 248 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AC120349.2-201ENST00000625002 298 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 XPOTP1-201ENST00000443317 2398 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 NEAT1-202ENST00000501122 22743 ntBASIC4.44□□□□□ -1.7
TCRBV7S3A2A0A539 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 AC087359.1-201ENST00000508335 1740 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 ELL2P3-201ENST00000457883 1602 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 Y_RNA.25-201ENST00000362528 102 ntBASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-444P-201ENST00000383988 108 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms