Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AP001269.3-201ENST00000588718 329 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC234772.3-201ENST00000602277 528 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC114878.2-201ENST00000604863 1251 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC010857.1-201ENST00000606398 594 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC023158.2-201ENST00000614876 543 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AP000770.2-201ENST00000623694 100 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SAGE4P-201ENST00000442271 3381 ntBASIC3.76□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC007390.2-201ENST00000606229 3803 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL133243.3-201ENST00000617415 3004 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNU4-28P-201ENST00000364739 141 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ZNF603P-201ENST00000405613 487 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL450992.3-201ENST00000413192 568 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 XKRYP1-201ENST00000423438 492 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL138785.1-201ENST00000425821 331 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC087650.1-201ENST00000431445 468 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 XKRYP2-201ENST00000432915 492 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RPS3AP54-201ENST00000435535 734 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RPL23AP46-201ENST00000438548 490 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 USP9YP22-201ENST00000438971 294 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL356535.1-201ENST00000440335 398 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC006011.1-201ENST00000442758 349 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ELOCP13-201ENST00000443934 329 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC007327.1-201ENST00000447461 264 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 MTND2P28-201ENST00000457540 1044 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC011979.1-201ENST00000472300 483 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC118282.1-201ENST00000506408 765 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC025674.1-201ENST00000507074 324 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC090071.1-201ENST00000507713 644 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC008958.1-201ENST00000511047 682 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 OR5AN2P-201ENST00000534535 896 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC090695.1-201ENST00000561269 1222 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL360157.1-201ENST00000565962 87 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC012417.1-201ENST00000582307 1039 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC022069.1-201ENST00000582910 658 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC013244.1-201ENST00000604279 193 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL451044.1-201ENST00000604867 238 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL354760.1-201ENST00000608357 643 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL049539.1-201ENST00000611964 459 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AC018529.3-201ENST00000624212 2254 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 LINC02471-203ENST00000641941 4752 ntBASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 BDP1P-201ENST00000582658 1990 ntBASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 AL592437.2-201ENST00000421655 2434 ntBASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SNORD35B-201ENST00000363660 87 ntBASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNA5SP505-201ENST00000364748 108 ntBASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 SNORD116.1-201ENST00000365628 92 ntBASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRBV4-1A0A0J9YWV2 RNU6-444P-201ENST00000383988 108 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms