Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC092470.1-201ENST00000546187 132 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091489.2-201ENST00000566263 604 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 PRELID3BP8-201ENST00000604148 295 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC090186.1-201ENST00000605991 572 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC100793.4-201ENST00000613683 429 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC100827.5-201ENST00000615883 426 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091932.2-201ENST00000623014 291 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR4496-201ENST00000635896 61 ntBASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA3Q9Y5H0 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 MAPK10-304ENST00000641341 3984 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 MAPK10-286ENST00000641208 8747 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 RNY4P24-201ENST00000362735 96 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 UBBP2-201ENST00000376781 231 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL031679.1-201ENST00000400616 525 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 DBIP1-201ENST00000401435 260 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 HSPA8P15-201ENST00000401676 786 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL512430.2-201ENST00000406786 339 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 UBTFL3-201ENST00000418934 1024 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL21P32-201ENST00000419877 477 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL589823.1-201ENST00000429577 183 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 DLGAP5P1-201ENST00000430307 464 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 PRELID3BP10-201ENST00000431957 584 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 UBE2V1P3-201ENST00000439651 417 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 HSPE1P28-201ENST00000443139 211 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 SUMO2P2-201ENST00000456482 255 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 RNA5SP103-201ENST00000459503 118 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC097484.1-201ENST00000471148 389 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 RPS29P22-201ENST00000472363 168 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 UBTFL6-201ENST00000477929 1024 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL049874.2-201ENST00000492636 288 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC109458.1-201ENST00000508858 316 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091912.1-201ENST00000511351 248 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC110775.1-201ENST00000513721 462 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC027369.5-201ENST00000533838 755 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC012414.6-201ENST00000568241 401 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 BNIP3P23-201ENST00000599655 511 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AP000403.1-201ENST00000603349 851 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AL133338.2-201ENST00000604292 736 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGA3Q9Y5H0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms