Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC013429.2-201ENST00000418798 781 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC092647.1-201ENST00000420654 287 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 C4BPAP2-201ENST00000428434 478 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 ZYG11AP1-201ENST00000430329 837 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RPL35AP21-201ENST00000437667 333 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RPL7AP61-201ENST00000443410 636 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 RPL5P32-201ENST00000454085 879 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 OR52A4P-201ENST00000472867 958 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC079140.3-201ENST00000511111 550 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC116347.2-201ENST00000514912 523 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC022447.1-201ENST00000515358 464 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC022880.1-201ENST00000534017 973 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 OR5AN2P-201ENST00000534535 896 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 MIR4270-201ENST00000581799 70 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 MIR4637-201ENST00000582405 84 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC078795.2-201ENST00000602835 1252 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 BNIP3P11-201ENST00000603878 563 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 MTND5P29-201ENST00000458676 1807 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 AC117529.2-201ENST00000512159 2068 ntBASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB1Q9Y5F3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC073136.1-201ENST00000449426 2884 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RNU6-433P-201ENST00000363216 104 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RNU5F-7P-201ENST00000363696 115 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RNU1-32P-201ENST00000363937 159 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC007066.1-201ENST00000392902 381 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RPL31P52-201ENST00000407532 367 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 SNORA77-201ENST00000408716 125 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RNA5SP296-201ENST00000410523 111 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC007899.1-201ENST00000412776 775 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC004022.2-201ENST00000413824 193 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 CDK8P2-201ENST00000415020 547 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AL365184.2-201ENST00000431139 435 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LARP1BP3-201ENST00000437229 869 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 RPS29P9-201ENST00000440360 171 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC107401.1-201ENST00000503426 685 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC006499.2-201ENST00000513470 337 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 MTND5P4-201ENST00000514978 288 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 ZNF705CP-201ENST00000530515 889 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 CYCSP28-201ENST00000534284 321 ntBASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB1Q9Y5F3 GTF2IP22-201ENST00000554443 182 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms