Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 DHX9P1-201ENST00000436565 3076 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 MTND4P5-201ENST00000435821 1374 ntBASIC5.04□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RNU6-317P-201ENST00000384031 107 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RNU6-1200P-201ENST00000384162 107 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AL645608.4-201ENST00000423619 154 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RPL7P4-203ENST00000430239 730 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 MTCO2P16-201ENST00000436962 677 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 PPIAP17-201ENST00000438507 471 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC013356.1-201ENST00000489027 564 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC020890.1-201ENST00000491837 504 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC092045.1-201ENST00000495716 1231 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC080014.1-201ENST00000496877 1201 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RN7SKP122-201ENST00000515923 296 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RNU6-678P-201ENST00000516832 109 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC131235.4-201ENST00000609288 620 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AL049536.1-201ENST00000625043 744 ntBASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.03□□□□□ -1.6
SSX2IPQ9Y2D8 AL133243.3-201ENST00000617415 3004 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 DCAF13P3-201ENST00000561147 1334 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AP000756.2-201ENST00000624168 2567 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 ASNSP1-201ENST00000518311 1939 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RN7SKP227-201ENST00000364445 330 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-619P-201ENST00000365146 108 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 Y_RNA.505-201ENST00000384489 102 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RNU1-82P-201ENST00000390851 165 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 SDHCP2-201ENST00000398565 501 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL031577.2-201ENST00000404133 280 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC009302.1-201ENST00000417147 390 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL022400.1-201ENST00000423946 935 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC093155.1-201ENST00000440164 826 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RPL7P1-201ENST00000468161 747 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RPL7P9-201ENST00000468715 747 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL161747.1-201ENST00000480068 358 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC005178.1-201ENST00000508392 440 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC108471.1-201ENST00000513977 287 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RNU6-1225P-201ENST00000516336 65 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 RPL23AP53-201ENST00000521854 457 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AL121766.1-201ENST00000547436 487 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC084783.1-201ENST00000565846 910 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC090751.1-201ENST00000566966 267 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC090312.1-201ENST00000580637 348 ntBASIC5.02□□□□□ -1.61
SSX2IPQ9Y2D8 AC073114.1-201ENST00000612027 490 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms