Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL512782.1-201ENST00000603093 364 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 FO393422.1-201ENST00000603908 708 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC244100.1-202ENST00000621554 382 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 AC091903.1-201ENST00000624322 454 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 MFSD8-217ENST00000641178 4374 ntBASIC8.37□□□□□ -1.07
PHF8Q9UPP1 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PHF8Q9UPP1 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 MROH3P-201ENST00000435735 2676 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.60-201ENST00000362831 98 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 RN7SKP162-201ENST00000363605 345 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.180-201ENST00000363867 113 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 RNU6-450P-201ENST00000364654 107 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 RNA5SP478-201ENST00000364657 115 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 RNU6-746P-201ENST00000384112 109 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.785-201ENST00000384290 109 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC068533.1-201ENST00000418542 415 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AL451139.1-201ENST00000434718 346 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC114495.1-201ENST00000441274 436 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC020550.1-201ENST00000447385 163 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC055855.1-201ENST00000489563 579 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.708-201ENST00000516950 96 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC131281.1-201ENST00000522984 164 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC022616.4-201ENST00000522985 181 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 DEFB109D-201ENST00000529497 240 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC078899.3-201ENST00000599065 212 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC141002.1-201ENST00000607025 279 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC105235.1-201ENST00000623208 1816 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 AC011755.1-201ENST00000623763 2049 ntBASIC8.36□□□□□ -1.07
PHF8Q9UPP1 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 RN7SKP128-201ENST00000364270 303 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 Y_RNA.291-201ENST00000364886 113 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 BX323014.1-201ENST00000412876 237 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL590664.1-201ENST00000448065 339 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC092967.1-201ENST00000449016 481 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC016027.4-201ENST00000450866 277 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC004801.2-202ENST00000463559 283 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC093267.1-201ENST00000489176 961 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC008526.1-201ENST00000509149 338 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 RNU6-202P-201ENST00000515998 96 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 RNA5SP34-201ENST00000516887 130 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 IGKV2-36-201ENST00000519999 223 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 IGLV2-28-201ENST00000520681 304 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AP003385.6-201ENST00000531603 374 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 MIR4505-201ENST00000582238 73 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL137067.2-201ENST00000621202 131 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AC018445.2-201ENST00000622987 260 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 AL691477.1-201ENST00000624398 162 ntBASIC8.35□□□□□ -1.07
PHF8Q9UPP1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms