Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC234064.1-201ENST00000436312 247 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 RPS4XP4-201ENST00000443195 763 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 EIF4A1P11-201ENST00000451239 222 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC233982.1-201ENST00000451247 436 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AL161747.1-201ENST00000480068 358 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC068587.1-201ENST00000483613 781 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC111193.1-201ENST00000504097 155 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC108043.1-201ENST00000512696 574 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 NPM1P47-201ENST00000560843 856 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC079171.1-201ENST00000568788 914 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC090312.1-201ENST00000580637 348 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AP001269.3-201ENST00000588718 329 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 ZNF92P3-201ENST00000596594 954 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC090246.1-201ENST00000616499 426 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AP005264.7-201ENST00000625003 745 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 BMS1P21-201ENST00000634565 365 ntBASIC4.39□□□□□ -1.71
SIX4Q9UIU6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIX4Q9UIU6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC026951.1-201ENST00000559530 2459 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC100871.1-201ENST00000507871 1456 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC093719.1-202ENST00000392735 373 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 ERHP2-201ENST00000402323 299 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AL079342.2-201ENST00000403367 482 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 RPL21P65-201ENST00000406094 466 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 PGBD4P8-201ENST00000412993 562 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AL365338.1-201ENST00000422282 858 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 TBCAP1-201ENST00000436520 327 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 GSTA7P-201ENST00000438425 448 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC002542.1-201ENST00000440683 193 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 RPL21P133-201ENST00000443666 476 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 HSFY6P-201ENST00000445573 403 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 RPL38P1-201ENST00000460914 211 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 RPL23AP2-201ENST00000471227 466 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC010486.2-201ENST00000505572 483 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AP002812.4-201ENST00000532139 286 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC090948.2-201ENST00000607363 564 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 RNU4-89P-201ENST00000607443 133 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AP003392.5-201ENST00000607857 415 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AP000255.1-201ENST00000610276 676 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 TUSC7.1-201ENST00000610969 165 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 AC026422.1-201ENST00000623961 452 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 MARK2P15-201ENST00000432204 2186 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 NSRP1P1-201ENST00000444067 1693 ntBASIC4.38□□□□□ -1.71
SIX4Q9UIU6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SIX4Q9UIU6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 AC092079.1-201ENST00000558620 1985 ntBASIC4.37□□□□□ -1.71
SIX4Q9UIU6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SIX4Q9UIU6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms