Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC243654.2-201ENST00000612843 443 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL603758.1-201ENST00000618654 241 ntBASIC6.2□□□□□ -1.42
CNTN3Q9P232 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CNTN3Q9P232 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNTN3Q9P232 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 SRRM1P3-201ENST00000426911 2678 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC005294.1-201ENST00000355509 281 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 RNY1P12-201ENST00000364251 105 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 RNA5SP131-201ENST00000365452 119 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 Y_RNA.381-201ENST00000365666 102 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 MIR130A-201ENST00000385274 89 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 MIR143-201ENST00000385300 106 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AL078604.1-201ENST00000404609 466 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AL590399.2-201ENST00000427536 309 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 ATP5JP1-201ENST00000431631 322 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC236972.2-201ENST00000434979 310 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC073410.1-201ENST00000435125 589 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 BNIP3P2-201ENST00000441221 577 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC243772.1-201ENST00000451620 410 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC010587.1-201ENST00000505809 469 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 RN7SKP96-201ENST00000516948 297 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC087241.2-201ENST00000535801 324 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 AC115085.1-201ENST00000588924 229 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 PSMA6P4-201ENST00000603247 718 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 FO393422.1-201ENST00000603908 708 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AL355816.1-201ENST00000607951 118 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.19□□□□□ -1.42
CNTN3Q9P232 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNTN3Q9P232 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNTN3Q9P232 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 LINC02019-201ENST00000608605 2060 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 RNU6-744P-201ENST00000365557 107 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 RNU6-1316P-201ENST00000384242 108 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 Y_RNA.474-201ENST00000384341 102 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 U3.25-201ENST00000391209 220 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC068050.1-201ENST00000394891 380 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNTN3Q9P232 TXNP7-201ENST00000406296 293 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 UQCRBP1-201ENST00000421129 336 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC079355.1-201ENST00000421770 223 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AL121776.1-201ENST00000429337 372 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 RBMY2QP-201ENST00000429799 1147 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC092013.1-201ENST00000438795 332 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 BX842559.2-201ENST00000451418 605 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 RN7SL72P-201ENST00000460697 269 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 APOOP2-201ENST00000461561 539 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AL136038.1-201ENST00000497246 351 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC103851.1-201ENST00000506833 274 ntBASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.18□□□□□ -1.42
CNTN3Q9P232 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms