Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RPL30P2-201ENST00000414021 291 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 SNRPFP2-201ENST00000440710 251 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RPL26P28-201ENST00000451325 435 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC011611.1-201ENST00000552179 197 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 SNORD39.2-201ENST00000579995 76 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 MIR3200-201ENST00000580767 85 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AL606834.2-201ENST00000602954 668 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AL442067.2-201ENST00000614033 363 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RNU6-525P-201ENST00000363685 104 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RN7SKP285-201ENST00000410137 318 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 DNAJC19P1-201ENST00000455312 319 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 SNORD105B-201ENST00000458770 79 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 CAB39P1-201ENST00000502277 460 ntBASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC88CQ9P219 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 ELL2P4-201ENST00000446870 1376 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 MIR128-1-201ENST00000384921 82 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 BX842559.1-201ENST00000419615 532 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC097713.2-201ENST00000430199 356 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 FTH1P6-201ENST00000430768 320 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC087312.1-201ENST00000471411 480 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 MIR4644-201ENST00000579929 84 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC011816.2-201ENST00000607089 556 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC015802.5-201ENST00000607478 399 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AP001002.2-201ENST00000625137 386 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.18□□□□□ -1.9
CCDC88CQ9P219 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC88CQ9P219 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC119744.1-201ENST00000454746 1715 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC104297.1-201ENST00000393779 870 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 NDUFB4P4-201ENST00000404822 243 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC063979.1-201ENST00000415539 377 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 NIPA2P2-201ENST00000496376 1083 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 FABP5P12-201ENST00000515543 389 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC004024.1-201ENST00000549244 247 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 DUX4L52-201ENST00000549363 777 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC105036.1-201ENST00000566222 271 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC017076.1-201ENST00000607613 578 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 OR6R2P-201ENST00000609216 300 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 RMST_8.1-201ENST00000610287 165 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC022960.2-201ENST00000616300 666 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AL513174.1-201ENST00000423182 629 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 MRPS18BP2-201ENST00000434310 759 ntBASIC3.17□□□□□ -1.9
CCDC88CQ9P219 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms