Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 KRR1P1-201ENST00000419430 803 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 MTCO2P21-201ENST00000419780 677 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AP000936.3-201ENST00000438127 255 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC092809.1-201ENST00000441469 474 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL035551.1-201ENST00000446931 348 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC004022.1-201ENST00000447766 1066 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL133244.1-201ENST00000456007 258 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL133477.1-201ENST00000457472 514 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC096992.1-201ENST00000459808 709 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 NAP1L1P3-201ENST00000462291 880 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 PPIAP21-201ENST00000464473 501 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 NDUFA5P9-201ENST00000472609 340 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC111193.1-201ENST00000504097 155 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC008802.1-201ENST00000519121 791 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 IGKV2D-10-201ENST00000520194 281 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 NPM1P6-201ENST00000521088 871 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 DEFB130C-202ENST00000530001 230 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC122134.1-201ENST00000565664 1104 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC023824.3-201ENST00000569003 562 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC022884.3-201ENST00000579571 248 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC245036.5-201ENST00000596330 847 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 EIF1P6-201ENST00000600054 334 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC025811.1-201ENST00000604312 472 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 BRDTP1-201ENST00000605735 677 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AL138478.1-201ENST00000612252 832 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC019226.2-201ENST00000625973 424 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 MAPK10-372ENST00000641954 3413 ntBASIC4.13□□□□□ -1.75
SIX2Q9NPC8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX2Q9NPC8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 RNU6-249P-201ENST00000363016 102 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AL513175.2-201ENST00000422071 443 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 C1DP1-201ENST00000426049 402 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 RSL24D1P6-201ENST00000426934 401 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AL117339.2-201ENST00000430475 180 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC068135.1-201ENST00000446164 246 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AL589880.1-201ENST00000448271 287 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AL162151.2-201ENST00000448875 158 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 RPL10P17-201ENST00000453852 316 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 RPL21P11-201ENST00000461458 483 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 BOLA3P3-201ENST00000505182 232 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC091860.1-201ENST00000505723 432 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC008565.1-201ENST00000509046 885 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 SUMO2P20-201ENST00000520803 283 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AP002812.4-201ENST00000532139 286 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 OR4U1P-201ENST00000554958 912 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 CYP2C60P-201ENST00000566088 139 ntBASIC4.12□□□□□ -1.75
SIX2Q9NPC8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX2Q9NPC8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms