Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 MIR212-201ENST00000586026 110 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 BX323046.1-201ENST00000610145 535 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 AL355472.4-201ENST00000610233 626 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSU72Q9NP77 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSU72Q9NP77 AC116158.1-201ENST00000560231 2129 ntBASIC5.66□□□□□ -1.5
SSU72Q9NP77 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SSU72Q9NP77 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SSU72Q9NP77 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.66□□□□□ -1.5
SSU72Q9NP77 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL080312.1-201ENST00000256654 824 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 Y_RNA.128-201ENST00000363391 112 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 MIR1-2-201ENST00000384961 85 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 MIR559-201ENST00000385188 96 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 Y_RNA.579-201ENST00000390939 94 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 PSMA6P1-201ENST00000400275 741 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC234781.4-201ENST00000419384 244 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 UQCRBP1-201ENST00000421129 336 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 MTCO3P21-201ENST00000430791 643 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 MTND3P2-201ENST00000438452 342 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL645937.3-201ENST00000453647 936 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 HMGN3P1-201ENST00000453847 193 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 PPIAP7-201ENST00000454070 489 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AZGP1P2-201ENST00000454506 345 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 RPL37P3-201ENST00000456825 293 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 MTCO3P2-201ENST00000457365 171 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC093166.4-201ENST00000457867 318 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 APOOP2-201ENST00000461561 539 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 RPL38P4-201ENST00000502376 214 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 RNU4-49P-201ENST00000516080 140 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AP000620.1-201ENST00000527147 504 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AP002373.2-201ENST00000541631 1060 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 HAUS8P1-201ENST00000549005 542 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC096996.1-201ENST00000563813 325 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 MRPS21P8-201ENST00000569196 235 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 SNRPGP17-201ENST00000603780 214 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC004853.1-201ENST00000604902 698 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC103710.3-201ENST00000608157 948 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSU72Q9NP77 MIR6070-201ENST00000613967 103 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL354950.2-201ENST00000617939 290 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC079684.1-201ENST00000621405 437 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AC211486.4-201ENST00000621495 113 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 uc_338.7-201ENST00000621834 124 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 AL138693.1-201ENST00000622219 129 ntBASIC5.65□□□□□ -1.5
SSU72Q9NP77 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.65□□□□□ -1.5
SSU72Q9NP77 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.65□□□□□ -1.51
SSU72Q9NP77 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSU72Q9NP77 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSU72Q9NP77 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.51
SSU72Q9NP77 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSU72Q9NP77 AC018809.2-201ENST00000602436 3823 ntBASIC5.65□□□□□ -1.51
SSU72Q9NP77 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms