Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RPL23AP81-201ENST00000455252 467 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC116533.1-201ENST00000459748 321 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RPS26P3-201ENST00000470205 348 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC090543.2-201ENST00000483963 348 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC004057.1-201ENST00000485827 348 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC139783.2-201ENST00000504847 1145 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 IGKV2-36-201ENST00000519999 223 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 C1GALT1P3-201ENST00000522049 819 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC010306.1-201ENST00000523223 1117 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 TRAV8-5-201ENST00000537369 341 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC063950.1-201ENST00000552036 308 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC090695.1-201ENST00000561269 1222 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC099676.1-201ENST00000608886 657 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC097478.2-201ENST00000610572 514 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AL592148.2-201ENST00000612210 372 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AF001550.2-201ENST00000636643 217 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 AC092162.3-201ENST00000624511 1624 ntBASIC4.35□□□□□ -1.71
PCDH9Q9HC56 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PCDH9Q9HC56 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 NRBF2P2-201ENST00000413087 861 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 JKAMPP1-201ENST00000413804 919 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 ELOCP9-201ENST00000418624 239 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL157831.1-201ENST00000426134 473 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 RPS6P15-201ENST00000431996 751 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 GSTA7P-201ENST00000438425 448 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC092809.1-201ENST00000441469 474 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 SETD6P1-201ENST00000444575 317 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 OR6K5P-201ENST00000447050 945 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC007327.1-201ENST00000447461 264 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC133473.1-201ENST00000455173 299 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 BX248409.1-201ENST00000455497 255 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 RN7SL303P-201ENST00000469773 251 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 PRDX3P4-201ENST00000470828 747 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 RN7SL481P-201ENST00000477764 299 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AP000563.1-201ENST00000490865 758 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 RNA5SP73-201ENST00000516744 108 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 SMARCE1P4-201ENST00000523647 241 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC023050.2-201ENST00000544968 387 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AADACP1-206ENST00000561502 1193 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC009094.1-201ENST00000564443 426 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 VN1R88P-201ENST00000596787 292 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC119501.1-201ENST00000603646 475 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AP005137.2-201ENST00000609238 400 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL158196.1-201ENST00000616786 434 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL157770.1-201ENST00000623049 439 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AL445363.3-201ENST00000623080 671 ntBASIC4.34□□□□□ -1.71
PCDH9Q9HC56 AC078883.4-201ENST00000623218 367 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms