Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL691482.1-201ENST00000453255 87 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC245028.2-201ENST00000458673 253 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC091951.2-201ENST00000500762 203 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC019235.1-201ENST00000503847 207 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNA5SP216-201ENST00000516111 123 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AP001189.2-201ENST00000527320 189 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 OR6C73P-201ENST00000546432 358 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC008083.2-201ENST00000546707 476 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 POLR2KP1-201ENST00000553226 168 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 MIR548Y-201ENST00000582739 110 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC069304.2-201ENST00000605154 435 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC008536.2-201ENST00000607284 349 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC098614.4-201ENST00000607601 462 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC108479.2-201ENST00000617314 601 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC126177.8-201ENST00000618339 1015 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL158209.2-201ENST00000619266 216 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL136221.1-201ENST00000621449 509 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL359880.1-201ENST00000621879 266 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL359697.1-201ENST00000624879 587 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC092326.2-201ENST00000624772 1561 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC046144.1-201ENST00000478559 1853 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 ZNF680P1-201ENST00000436625 1469 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 Y_RNA.38-201ENST00000362617 102 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RNU6-216P-201ENST00000363282 104 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RNU5F-7P-201ENST00000363696 115 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 MIR141-201ENST00000384975 95 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RPS3AP23-201ENST00000401762 784 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RPL23AP47-201ENST00000408017 460 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RPS27AP14-201ENST00000422868 454 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC007742.1-201ENST00000425789 329 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 MTND4LP10-201ENST00000435146 291 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 ELOCP26-201ENST00000436067 329 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC108463.1-201ENST00000450258 347 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 snoU109.1-201ENST00000459339 135 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 RPS17P2-201ENST00000461663 408 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC010307.1-201ENST00000467206 836 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 TRBV8-2-201ENST00000475637 270 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC008628.2-201ENST00000502605 298 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC048346.1-201ENST00000510247 144 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AP002748.2-201ENST00000528671 348 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AP001880.2-201ENST00000538233 448 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL138976.2-201ENST00000563989 694 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 MIR4697-201ENST00000582977 78 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 UBE2V2P2-201ENST00000587677 504 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC044792.1-201ENST00000593294 196 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 DUXAP4-201ENST00000603046 613 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AL161729.4-201ENST00000604650 476 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC018690.1-201ENST00000608144 626 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC103710.1-201ENST00000610003 901 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 CRYM-AS1-204ENST00000637983 556 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC017104.4-201ENST00000636283 1592 ntBASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BCAS3Q9H6U6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms