Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL354984.3-201ENST00000604803 325 ntBASIC3.93□□□□□ -1.78
UBQLN3Q9H347 RNA5SP108-201ENST00000605921 117 ntBASIC3.93□□□□□ -1.78
UBQLN3Q9H347 AP005137.2-201ENST00000609238 400 ntBASIC3.93□□□□□ -1.78
UBQLN3Q9H347 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.93□□□□□ -1.78
UBQLN3Q9H347 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
UBQLN3Q9H347 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBQLN3Q9H347 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBQLN3Q9H347 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBQLN3Q9H347 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC005261.4-201ENST00000600047 1385 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 NOL8P1-201ENST00000508336 3529 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 RNA5SP513-201ENST00000364648 118 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 RNU6-619P-201ENST00000365146 108 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 RNU6-444P-201ENST00000383988 108 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TMSB4XP8-201ENST00000402089 135 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 NRBF2P2-201ENST00000413087 861 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TMSB4XP6-201ENST00000415187 135 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 TMSB4XP1-201ENST00000424567 135 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 OSTCP5-201ENST00000425293 453 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 MTCO1P53-201ENST00000441633 699 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 NUTF2P3-201ENST00000448540 384 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AL451050.1-201ENST00000450126 415 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 RPL35AP15-201ENST00000468042 339 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC146507.1-201ENST00000468335 354 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC108145.1-201ENST00000503770 153 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC048346.1-201ENST00000510247 144 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 Vault.1-201ENST00000516474 102 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 CYCSP29-201ENST00000533731 318 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 IPO5P1-202ENST00000600039 287 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC091057.3-201ENST00000602684 733 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC068790.5-201ENST00000602741 355 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 HSPE1P14-201ENST00000605812 302 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 FAM27D1-201ENST00000612308 341 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC016597.2-201ENST00000613256 341 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC026368.1-201ENST00000614934 690 ntBASIC3.92□□□□□ -1.78
UBQLN3Q9H347 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UBQLN3Q9H347 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 MIR383-201ENST00000362257 73 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 RNA5SP388-201ENST00000362584 119 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 RNA5SP175-201ENST00000364275 119 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AL161909.1-201ENST00000397390 712 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AL161631.1-201ENST00000417933 486 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 NANOGP6-201ENST00000429190 847 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 UBE2V1P1-201ENST00000430836 445 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 GTF2IP3-201ENST00000433887 494 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 CKS1BP5-201ENST00000434172 273 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
UBQLN3Q9H347 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
UBQLN3Q9H347 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms