Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 RPL31P53-201ENST00000457065 348 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 CEACAMP4-201ENST00000457676 421 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AP001086.1-201ENST00000494882 321 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL139099.1-201ENST00000497398 403 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC026784.1-201ENST00000507986 352 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC021146.1-201ENST00000511202 716 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 OR4A2P-201ENST00000527276 913 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AL121766.1-201ENST00000547436 487 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC092474.3-201ENST00000603022 568 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC112230.1-201ENST00000604342 547 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 Z82195.1-201ENST00000604558 398 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 AC009032.1-201ENST00000617574 431 ntBASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
RSPO3Q9BXY4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC006042.3-201ENST00000454684 1469 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 SNORA71.3-201ENST00000362582 128 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 RNU6-819P-201ENST00000364116 107 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 RNA5SP235-201ENST00000365411 114 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AP002088.1-201ENST00000382740 395 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 HMGB3P18-201ENST00000406327 590 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 RPL31P52-201ENST00000407532 367 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 SNORA57.3-201ENST00000411095 141 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 MTND2P15-201ENST00000418575 892 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC006989.1-201ENST00000427212 131 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AL590623.1-201ENST00000427864 105 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 ZFAND6P1-201ENST00000434138 605 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 RPS4XP2-201ENST00000458402 793 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 RN7SKP141-201ENST00000516167 338 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC027281.1-201ENST00000574178 758 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AL365503.1-201ENST00000605247 905 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC034236.3-201ENST00000605999 461 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC005344.1-201ENST00000613391 459 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC099669.2-201ENST00000616549 437 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC039056.2-201ENST00000622261 511 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC058791.1-201ENST00000608412 3198 ntBASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
RSPO3Q9BXY4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 MTND4P21-201ENST00000453886 1357 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 OR4A15-201ENST00000314706 1035 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 MIR208A-201ENST00000362287 71 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 MTCO1P57-201ENST00000432182 261 ntBASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.28□□□□□ -1.88
RSPO3Q9BXY4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms