Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ABCA3Q99758 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.28□□□□□ -1.73
ABCA3Q99758 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ABCA3Q99758 HSPE1P8-201ENST00000406997 288 ntBASIC4.27□□□□□ -1.73
ABCA3Q99758 AL139281.1-201ENST00000422120 335 ntBASIC4.27□□□□□ -1.73
ABCA3Q99758 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCA3Q99758 AC093156.1-201ENST00000440382 670 ntBASIC4.27□□□□□ -1.73
ABCA3Q99758 AC010306.1-201ENST00000523223 1117 ntBASIC4.27□□□□□ -1.73
ABCA3Q99758 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
ABCA3Q99758 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ABCA3Q99758 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.27□□□□□ -1.73
ABCA3Q99758 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ABCA3Q99758 RNU4-82P-201ENST00000362443 140 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCA3Q99758 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.26□□□□□ -1.73
ABCA3Q99758 AL133477.1-201ENST00000457472 514 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.26□□□□□ -1.73
ABCA3Q99758 RNU6-237P-201ENST00000515985 71 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.26□□□□□ -1.73
ABCA3Q99758 HMGB1P6-201ENST00000569046 646 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AL356321.1-201ENST00000621360 228 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.26□□□□□ -1.73
ABCA3Q99758 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
ABCA3Q99758 RNU4-44P-201ENST00000363050 141 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 SNORA18.3-201ENST00000384122 132 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC002075.2-201ENST00000425207 252 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC099560.2-201ENST00000457554 255 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ABCA3Q99758 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.26□□□□□ -1.73
ABCA3Q99758 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.26□□□□□ -1.73
ABCA3Q99758 AL359535.1-201ENST00000612100 1087 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 AC017071.1-201ENST00000564407 2204 ntBASIC4.26□□□□□ -1.73
ABCA3Q99758 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ABCA3Q99758 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ABCA3Q99758 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
ABCA3Q99758 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ABCA3Q99758 SNORA71.1-201ENST00000364523 117 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ABCA3Q99758 MIR93-201ENST00000385024 80 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.25□□□□□ -1.73
ABCA3Q99758 AL357552.1-201ENST00000445254 415 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.25□□□□□ -1.73
ABCA3Q99758 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.25□□□□□ -1.73
ABCA3Q99758 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.25□□□□□ -1.73
ABCA3Q99758 EIF5A2P1-201ENST00000564027 460 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 DPRXP4-201ENST00000578053 568 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 MIR4769-201ENST00000584126 77 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.25□□□□□ -1.73
ABCA3Q99758 AC007619.2-201ENST00000605743 379 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.25□□□□□ -1.73
ABCA3Q99758 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ABCA3Q99758 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ABCA3Q99758 AC104446.1-201ENST00000613728 1321 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ABCA3Q99758 RIOK3P1-201ENST00000418778 1528 ntBASIC4.25□□□□□ -1.73
ABCA3Q99758 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.24□□□□□ -1.73
ABCA3Q99758 THAP12P8-201ENST00000447914 2115 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ABCA3Q99758 JKAMPP1-201ENST00000413804 919 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AL589765.3-201ENST00000446084 462 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 BX276092.4-201ENST00000452056 248 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC010469.1-201ENST00000463864 576 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 SUMO2P4-201ENST00000504193 276 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.24□□□□□ -1.73
ABCA3Q99758 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.24□□□□□ -1.73
ABCA3Q99758 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.24□□□□□ -1.73
ABCA3Q99758 BNIP3P38-201ENST00000601117 544 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC245100.7-201ENST00000609678 442 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
ABCA3Q99758 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.24□□□□□ -1.73
ABCA3Q99758 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ABCA3Q99758 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ABCA3Q99758 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ABCA3Q99758 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ABCA3Q99758 RPS4XP8-201ENST00000402039 771 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 OR6C64P-201ENST00000419708 825 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.24□□□□□ -1.73
ABCA3Q99758 AC073069.1-201ENST00000428657 441 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC008264.1-201ENST00000447612 367 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC117440.1-201ENST00000474107 571 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC126389.1-201ENST00000477436 290 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.24□□□□□ -1.73
ABCA3Q99758 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC022882.1-201ENST00000532142 501 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.24□□□□□ -1.73
ABCA3Q99758 NRBF2P5-201ENST00000603087 788 ntBASIC4.24□□□□□ -1.73
ABCA3Q99758 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms