Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AL031679.1-201ENST00000400616 525 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AC017037.2-201ENST00000513850 890 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 AL139174.1-201ENST00000531489 886 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.32□□□□□ -1.56
IFT140Q96RY7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 VN1R90P-201ENST00000595717 726 ntBASIC5.32□□□□□ -1.56
IFT140Q96RY7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
IFT140Q96RY7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT140Q96RY7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT140Q96RY7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 AL513302.2-201ENST00000562313 1842 ntBASIC5.31□□□□□ -1.56
IFT140Q96RY7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 RHOT1P2-201ENST00000366423 333 ntBASIC5.31□□□□□ -1.56
IFT140Q96RY7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.31□□□□□ -1.56
IFT140Q96RY7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 AC008264.1-201ENST00000447612 367 ntBASIC5.31□□□□□ -1.56
IFT140Q96RY7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.31□□□□□ -1.56
IFT140Q96RY7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.31□□□□□ -1.56
IFT140Q96RY7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
IFT140Q96RY7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.3□□□□□ -1.56
IFT140Q96RY7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
IFT140Q96RY7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
IFT140Q96RY7 HSPE1P8-201ENST00000406997 288 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.3□□□□□ -1.56
IFT140Q96RY7 RPS24P13-201ENST00000442520 397 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 AL357552.1-201ENST00000445254 415 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 RPS4XP13-201ENST00000483219 789 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 RPL23AP73-201ENST00000492507 471 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 RNA5SP154-201ENST00000516193 111 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 AC015917.1-201ENST00000579654 510 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.3□□□□□ -1.56
IFT140Q96RY7 AC138627.1-204ENST00000641894 765 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 OR51C1P-202ENST00000641159 1444 ntBASIC5.3□□□□□ -1.56
IFT140Q96RY7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
IFT140Q96RY7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
IFT140Q96RY7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT140Q96RY7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT140Q96RY7 U3.12-201ENST00000364498 214 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 MIR513A2-201ENST00000385249 127 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 RPS26P47-201ENST00000427219 348 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC108734.1-201ENST00000439549 399 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 RPS26P3-201ENST00000470205 348 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC126389.1-201ENST00000477436 290 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC004057.1-201ENST00000485827 348 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.29□□□□□ -1.56
IFT140Q96RY7 HMGB1P6-201ENST00000569046 646 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.29□□□□□ -1.56
IFT140Q96RY7 CYCSP41-201ENST00000616920 296 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 AC099506.2-201ENST00000623074 221 ntBASIC5.29□□□□□ -1.56
IFT140Q96RY7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
IFT140Q96RY7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
IFT140Q96RY7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 MTCO1P7-201ENST00000419523 1542 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 RPL21P112-201ENST00000434403 463 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 FTH1P1-201ENST00000437933 532 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 RN7SKP116-201ENST00000516902 319 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 AC010306.1-201ENST00000523223 1117 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 AL365361.1-201ENST00000566942 3481 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 AC017071.1-201ENST00000564407 2204 ntBASIC5.28□□□□□ -1.56
IFT140Q96RY7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
IFT140Q96RY7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
IFT140Q96RY7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT140Q96RY7 RN7SKP222-201ENST00000410651 315 ntBASIC5.27□□□□□ -1.57
IFT140Q96RY7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.27□□□□□ -1.57
IFT140Q96RY7 AC016696.1-201ENST00000446949 318 ntBASIC5.27□□□□□ -1.57
IFT140Q96RY7 HIGD1AP13-201ENST00000509878 289 ntBASIC5.27□□□□□ -1.57
IFT140Q96RY7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.27□□□□□ -1.57
IFT140Q96RY7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.27□□□□□ -1.57
IFT140Q96RY7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT140Q96RY7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
IFT140Q96RY7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms