Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC108075.1-201ENST00000424692 529 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC010881.1-201ENST00000433830 235 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 Z74696.2-201ENST00000436514 498 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 MTATP6P13-201ENST00000438531 667 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL512286.1-201ENST00000439244 400 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 NPM1P49-201ENST00000448027 714 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 NPM1P39-201ENST00000449818 867 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 RPL18AP17-201ENST00000455326 198 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 GYG1P1-201ENST00000460864 698 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 RN7SL329P-201ENST00000467740 299 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC013828.1-201ENST00000481845 158 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 OR4G11P-201ENST00000492842 939 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 MYL12AP1-201ENST00000518490 515 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AP003392.2-201ENST00000527269 208 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC137768.1-201ENST00000549998 553 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC069304.2-201ENST00000605154 435 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC090510.2-201ENST00000617465 629 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 CYP4F35P-202ENST00000636121 390 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX18Q96RF0 AC093775.1-201ENST00000624154 1868 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.56□□□□□ -1.68
SNX18Q96RF0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX18Q96RF0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC090017.1-201ENST00000548612 1779 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC092435.4-201ENST00000623012 4159 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC108751.5-201ENST00000492880 1336 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 Y_RNA.6-201ENST00000362350 114 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 RNU6-251P-201ENST00000363235 104 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 RNA5SP372-201ENST00000390836 115 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 AL645927.1-201ENST00000396783 406 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 AL512430.2-201ENST00000406786 339 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 FCF1P9-201ENST00000412546 282 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 MTCYBP38-201ENST00000417160 1123 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 TMBIM7P-201ENST00000418074 855 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC013429.2-201ENST00000418798 781 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC009965.2-201ENST00000425328 970 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 ELOCP10-201ENST00000440624 327 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 MTND2P20-201ENST00000440805 661 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 DNAJC19P1-201ENST00000455312 319 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 RNA5SP269-201ENST00000459032 137 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 RN7SL443P-201ENST00000464331 290 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 RPL7AP6-201ENST00000477943 801 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 RN7SL817P-201ENST00000480777 288 ntBASIC4.55□□□□□ -1.68
SNX18Q96RF0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SNX18Q96RF0 AC090013.1-201ENST00000485147 480 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms