Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AL445189.1-201ENST00000405722 338 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 MTND2P15-201ENST00000418575 892 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 MOB1AP1-201ENST00000430903 535 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 Z95327.1-201ENST00000446082 482 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 RPS20P21-201ENST00000466859 343 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC091959.2-201ENST00000477363 321 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC011037.1-201ENST00000483964 558 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 ARL2BPP6-201ENST00000512757 439 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 SCARNA14-201ENST00000516903 136 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 IGKV2-23-201ENST00000518729 323 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC008489.1-201ENST00000524271 483 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC034105.4-201ENST00000568304 277 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 MIR4458-201ENST00000578872 75 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC115085.1-201ENST00000588924 229 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 SNORA62.6-201ENST00000606322 83 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 RMST_8.1-201ENST00000610287 165 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 U6.48-201ENST00000618523 106 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC020978.9-201ENST00000624380 1141 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 AL049737.1-201ENST00000413920 1403 ntBASIC3.49□□□□□ -1.85
COL21A1Q96P44 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL21A1Q96P44 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
COL21A1Q96P44 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL21A1Q96P44 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL21A1Q96P44 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL21A1Q96P44 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC023347.2-201ENST00000433994 462 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL353093.1-201ENST00000441292 436 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC006480.1-201ENST00000449887 378 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC025181.1-201ENST00000477507 416 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC093853.1-201ENST00000515689 483 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 RN7SKP60-201ENST00000516985 239 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 IGKV2-36-201ENST00000519999 223 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AL139174.1-201ENST00000531489 886 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 OR4U1P-201ENST00000554958 912 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 MIR3186-201ENST00000577404 85 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC010680.3-201ENST00000604215 520 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL21A1Q96P44 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC092628.2-201ENST00000622492 339 ntBASIC3.48□□□□□ -1.85
COL21A1Q96P44 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL21A1Q96P44 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
COL21A1Q96P44 AC024560.2-201ENST00000507981 1497 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.47□□□□□ -1.85
COL21A1Q96P44 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 ZNF90P1-201ENST00000480493 1951 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL21A1Q96P44 RNU6-283P-201ENST00000364788 107 ntBASIC3.47□□□□□ -1.85
COL21A1Q96P44 RNU6-883P-201ENST00000384597 107 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms