Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-253P-201ENST00000384730 105 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 HSPD1P16-201ENST00000402302 394 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL021407.1-201ENST00000404531 386 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL139128.1-201ENST00000413921 941 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 RPP40P1-201ENST00000426762 456 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 ISCA1P2-201ENST00000438679 421 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 ELOCP8-201ENST00000439309 332 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 ELOCP15-201ENST00000442090 332 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 RPL35AP28-201ENST00000459730 331 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC092754.2-201ENST00000463506 460 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC022795.1-201ENST00000473808 480 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 OR5AK1P-201ENST00000524837 922 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 MTCYBP33-201ENST00000575007 1130 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 MIR4270-201ENST00000581799 70 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 IMMP1LP1-201ENST00000605170 488 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AC007494.3-201ENST00000624660 743 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC025125.1-201ENST00000624743 1922 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 SNORA4.1-201ENST00000364263 144 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AL133270.1-201ENST00000402635 279 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 MTCO3P31-201ENST00000405526 789 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 MORF4L1P6-201ENST00000418771 268 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 VN1R108P-201ENST00000431580 830 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LYPLA1P1-201ENST00000434514 622 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC108463.1-201ENST00000450258 347 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC097262.1-201ENST00000452559 548 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 RPL31P3-201ENST00000458430 332 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC093281.2-201ENST00000510153 597 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC110792.2-201ENST00000510278 224 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 KRT19P6-201ENST00000510983 209 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 MIR4458-201ENST00000578872 75 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 NBR2-204ENST00000587322 63 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC112220.3-201ENST00000605502 502 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC024940.4-201ENST00000605507 246 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP3Q96JB5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 SAGE2P-201ENST00000420011 2126 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 AC135352.1-201ENST00000506173 1418 ntBASIC5.18□□□□□ -1.58
CDK5RAP3Q96JB5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms